Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01071 ATGCCAAGAGTGGCCGAGATCAGAGATAATAGGTGGGACTTGACTGGTGGCGACGACTTCAACTTCAGTGACAACAATTCTAGTGATGGAGCATCCACTTTCGGTGGTGGTGGTGGTGCAACACCATCTTCCTCTGGTGGAGACAAAAACCTTAACCCCAGGTTGCTCCTCAACTCTTTCGAACCCCGTTTTTGTCTTTCAACAAAAAGCCGCGACAGAAACGGAAACAAAGAGAAAGCTGAAATTGCAAGTACCTGTCTTAAAAGACGAAGAGGGAAAATGTGGGGTTTTGGTGGTAGATATTATTGGGGAAGAAAGTTAACTCGTGAGAAAGTGAATGGGATAGTTGTGGTGTTCGCATGGATGTCAAGCGAGGAAAAGCACTTGATGAGATACGTGGACCTCTACTCTTCTGTTGGATGGGATTCACTCGTCTGCCAGTCTCAATTTCTCAATATGTTCTTCCCTGAGAAAGCCACAATTCTTGCTGTTGAAATTCTTAATGAACTTATTGAGGTGCTGAAAATTAGGCCTTGTCCCATTGTCTTTGCATCTTTTTCAGGAGGTCCAAATTCTTGTATGTTCAAGGTTCTTCAGATGATCAGTGGGAAGTGTGAATCACATAATATGGAAGATTACCAGCTTGTTAGAGACTGTATTTCTGGCTACATTTATGATTCCTGTCCAGTTGACTTTACCAGTGATATGGGTGTTCGGTTTATTCTACACCCAACTGTTTTAAAAGTTTCCCATCCGCCAAGATTTACTTCATGGATTGCCAATGGCATAGCATCTGGTCTTGATTCTCTTTTCCTCAGCAGATTTGAATCACAACGTGCAGAGTATTGGCGAACACTTTACTCCACCACTAGTATGCAGGTCCCGTATCTCATTTTGTGTTCAGAAAATGATGATCTTGCTCCTTTTCAAGTTATTTCAAATTTTTGTCATCGTCTAAAAGACCTTGGTGGGGATGTCAAACTGATAAAATGGAGTGCGTCTTCTCATGTAGGTCATTTTCGGCATCATCCAGATGAGTACAAGGCTGCTATCACTGAGATCCTTGGCAAGGCAGTTGCAATTTATAGTCACAAAAATAGACAAATTGAGTATGAGAAACTGGGCATAGAGGGAACAAAAGATGAGATCACGGATCCTTTCTCTGAATTGAGGAAAGCAGCAATGACCTCAACTAGTTTTCAGGGTTTTGCTCTTGCTCCAAGTGACAATTTGTCTCCTAGTTCAATGGAATATTATGATGGTAAAGATGTTGGCTCCATAACAGATGAACGCAAAGGAAGTTTTATTCATCTCCCAAGCCGTCCAAGCATCAATGCACATGGGGTTCTTGGCCAAGTATTGTTTGATGTTTGTGTTCCAAAAAATGTGGAGGATTGGGATGTCAGGTCAACATCCAAGAATGCACGACTATTAGCAGGTGAATTCTCTGCAAACTTGAAGGTTGATGTTTTCTTCAAAATTTTTAGGGAGATGTAA 1497 0.4168 MPRVAEIRDNRWDLTGGDDFNFSDNNSSDGASTFGGGGGATPSSSGGDKNLNPRLLLNSFEPRFCLSTKSRDRNGNKEKAEIASTCLKRRRGKMWGFGGRYYWGRKLTREKVNGIVVVFAWMSSEEKHLMRYVDLYSSVGWDSLVCQSQFLNMFFPEKATILAVEILNELIEVLKIRPCPIVFASFSGGPNSCMFKVLQMISGKCESHNMEDYQLVRDCISGYIYDSCPVDFTSDMGVRFILHPTVLKVSHPPRFTSWIANGIASGLDSLFLSRFESQRAEYWRTLYSTTSMQVPYLILCSENDDLAPFQVISNFCHRLKDLGGDVKLIKWSASSHVGHFRHHPDEYKAAITEILGKAVAIYSHKNRQIEYEKLGIEGTKDEITDPFSELRKAAMTSTSFQGFALAPSDNLSPSSMEYYDGKDVGSITDERKGSFIHLPSRPSINAHGVLGQVLFDVCVPKNVEDWDVRSTSKNARLLAGEFSANLKVDVFFKIFREM* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01071 498 MobiDBLite consensus disorder prediction 25 48 - -
Rops10g01071 498 Pfam Eukaryotic protein of unknown function (DUF829) 220 466 IPR008547 -
Rops10g01071 498 Pfam Eukaryotic protein of unknown function (DUF829) 115 193 IPR008547 -
Rops10g01071 498 Gene3D alpha/beta hydrolase 217 363 IPR029058 -
Rops10g01071 498 PANTHER UNCHARACTERIZED 105 360 IPR008547 -
Rops10g01071 498 SUPERFAMILY alpha/beta-Hydrolases 160 357 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01071 Rops-Chr10 22512130 22517143 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01071 - - gmx:100791690 671.389
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01071 10 22512130 22517143 Rops10g01071 10 22512130 22517143 ECH