Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01060 ATGGCCATGGCCACAGCTATTCTCTGTCCTCAGAACATCACAGGAGCCATCGTGAGCTCAAGTAGCAAGACCAAGAAGAGAATGAACAAAGTGGCACACGTGAGAGGCCTAAATTCATTTGGGGGACTAAAGGCAAGCAATGGTGTGATCTCAATGGGGCTTCCTTTGAGCACTGAGAAGTGTTTTGCTAAGATTGTGAAAGCCGCAACATCAAGTGGAAAAGGAAAGGGAGGAGGGGCAGTCTCATCCACGTGCAATGCAGCAGGTGAGATATTCACCATTGCTGCTATCATGAATGGCCTTGTTCTCGTTGGGGTTGCTGTTGGGTTTGCCCTTCTACGAGTGGAAGCATGGGTGGAGGAGTCCGAGACAGAATGA 378 0.4947 MAMATAILCPQNITGAIVSSSSKTKKRMNKVAHVRGLNSFGGLKASNGVISMGLPLSTEKCFAKIVKAATSSGKGKGGGAVSSTCNAAGEIFTIAAIMNGLVLVGVAVGFALLRVEAWVEESETE* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01060 125 Hamap Cytochrome b6-f complex subunit 7 [petM]. 87 118 IPR012595 GO:0009512
Rops10g01060 125 PANTHER B6F COMPLEX SUBUNIT, PUTATIVE, EXPRESSED-RELATED 1 123 - -
Rops10g01060 125 Pfam PetM family of cytochrome b6f complex subunit 7 89 116 IPR012595 GO:0009512
Rops10g01060 125 SUPERFAMILY PetM subunit of the cytochrome b6f complex 88 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01060 Rops-Chr10 22318686 22319307 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01060 - - gmx:100306520 186.422
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01060 10 22318686 22319307 Rops10g01060 10 22318686 22319307 ECH