Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01054 ATGCTTATAAATAAGAATTCAACTGATCTACTTGCACAATTGATTTTAAATCTATTGATGGTTTTAAAGGCTGTTGAAGTCACCAATGAAGTTAATTTATGGGCTGAAAAAGAGACAAATGGCCTTATCAAAGCGGTTCTTCCTCCCGGGTCAGTTAATAGCTCAACTAGGCTCATCCTTGTAAATGCTCTATACTTCAAAGGAGCATGGAATGAGAAGTTTGACGCTTCAAAAACGAAAGAGTATGATTTTCACCTTCTTAATGGCAGCTCAATAAAGGCTCCCTTCATGATCAGCAAGAAGAAGCAGTTTATTAGAGTTTTTGAAGGTTTCAAAGTCCTTGGTCTTCCTTATAAGCAAGGTGAAGATAAGGGTAGTTTCTCTATGTACTTTTTTCTTCCAGATGCAAAAGATGGTCTGTCTGCTTTGGTTGAGAAGGTGGCTTATGAATCTGGGTTCCTGGAACGCAAGCTTCCTAATCGAAAGGTGGAAGTACGTGACTTTAGGATTCCAAGATTCAAAATTTCCTTTGGGGTTGAAACTTCTAACATGTTGAAGGAGATGGGAGTAGTCTTGCCTTTCTCAGGTGGAGATTTGACCAATATGGTGGACTCTCCTCTGGGTCAAAACCTGAATGTTTCTAACATATTTCACAAGTCTTTTATTGAAGTAAATGAAGAAGGCACTGAAGCTGCGGCGATCAGTGGTGTAACTATTGTACTGTCAAGTTTGCCTACTCGGATAGACTTTGTAGCTGATCACCCTTTCTTGTTCATGATCAGAGAAGATTTGATTGGGACAATACTCTTTATTGGGCAGGTGCTCAACCCTCTTGCTGGGTAA 843 0.3974 MLINKNSTDLLAQLILNLLMVLKAVEVTNEVNLWAEKETNGLIKAVLPPGSVNSSTRLILVNALYFKGAWNEKFDASKTKEYDFHLLNGSSIKAPFMISKKKQFIRVFEGFKVLGLPYKQGEDKGSFSMYFFLPDAKDGLSALVEKVAYESGFLERKLPNRKVEVRDFRIPRFKISFGVETSNMLKEMGVVLPFSGGDLTNMVDSPLGQNLNVSNIFHKSFIEVNEEGTEAAAISGVTIVLSSLPTRIDFVADHPFLFMIREDLIGTILFIGQVLNPLAG* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01054 280 Gene3D Serpins superfamily 242 279 - -
Rops10g01054 280 CDD serpinP_plants 23 277 - -
Rops10g01054 280 SMART serpin2 8 277 IPR023796 -
Rops10g01054 280 FunFam Serpin family A member 1 239 279 - -
Rops10g01054 280 Gene3D - 70 187 IPR042185 -
Rops10g01054 280 ProSitePatterns Serpins signature. 250 260 IPR023795 -
Rops10g01054 280 Pfam Serpin (serine protease inhibitor) 27 277 IPR023796 -
Rops10g01054 280 Gene3D - 198 241 - -
Rops10g01054 280 SUPERFAMILY Serpins 23 277 IPR036186 -
Rops10g01054 280 Gene3D Antithrombin, subunit I, domain 2 15 68 IPR042178 -
Rops10g01054 280 PANTHER SERINE PROTEASE INHIBITOR, SERPIN 25 277 IPR000215 GO:0004867|GO:0005615
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01054 Rops-Chr10 22241510 22242352 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01054 K13963 - gmx:100775287 415.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01054 10 22241510 22242352 Rops10g01054 10 22241510 22242352 ECH