Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01015 ATGGCTTCTAAGTTCTTCTCGCTATTTCTCATCTTTCTAGCACTCCCTCATCCATATGCATTTGTGAATGGAGATACAACTTTGATCAAGAGAACTTGCAAGAACACCATGTACTACAAACTCTGCTTCTCTTCCCTCAAATCCGATCCCAGCAGCCCAAATGCAGACCCTAAGGGCCTAGCTGTGATCATGGTTGGCTTTGGAATGACCAATGCCACCTCCACTTCTTCATACCTGTCTTCAAAGTTGCTCATCCCCTCCAACAACCCAACTTTGAAAAGGGTCCTTAAGGAATGTGCAGATAAGTACACATATGCTGGTGATGCCCTCCAAGCTTCGATGCAGGATTTGGCTAATGAGGAATATGACTATGCTTACATGCACATCACTGCAGCCAAAGATTACCCAAATGCTTGTCACAATGCATTCAAACGGTATCCTGGTTTGGTTTATCTTCCTGATCTTGCTCGTAGAGAGAATGATTTGAAGCATATTTGTGATGTGGCAATGGGGATCATAGATAATCTCAATTGGTAG 537 0.4339 MASKFFSLFLIFLALPHPYAFVNGDTTLIKRTCKNTMYYKLCFSSLKSDPSSPNADPKGLAVIMVGFGMTNATSTSSYLSSKLLIPSNNPTLKRVLKECADKYTYAGDALQASMQDLANEEYDYAYMHITAAKDYPNACHNAFKRYPGLVYLPDLARRENDLKHICDVAMGIIDNLNW* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01015 178 FunFam Cell wall / vacuolar inhibitor of fructosidase 2 24 176 - -
Rops10g01015 178 Gene3D Invertase/pectin methylesterase inhibitor family protein 24 176 IPR035513 -
Rops10g01015 178 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 26 176 IPR035513 -
Rops10g01015 178 CDD PMEI_like 33 175 - -
Rops10g01015 178 SMART PMEI_2 24 172 IPR006501 GO:0004857
Rops10g01015 178 NCBIfam pectinesterase inhibitor domain 6 176 IPR006501 GO:0004857
Rops10g01015 178 PANTHER PECTINESTERASE INHIBITOR-LIKE 4 176 - -
Rops10g01015 178 Pfam Plant invertase/pectin methylesterase inhibitor 28 171 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01015 Rops-Chr10 21706955 21707670 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01015 - - gmx:100810425 295.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01015 10 21706955 21707670 Rops10g01015 10 21706955 21707670 ECH