Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01006 ATGGACCATTCCTATCGGCGCCGGCGCCGAACATGGTGTTGCTCTTTCGCCGTTCCACCTGCCAGCCCGGAGCTCCGGCCCAAATCCGAGGCCCAATTAAAGCCCAGTTTTTCAGTTCCAAGTTCTCCTCAGAGCACCAAATCCGGGTCACGAATCGTGGGTCGGATCGACCCTCGTCGGATCTTGTCCCCTGGAAGAGTCTCACCCATTGAAGATGTTGTTCCAGATCCTTCTCCGGTACCCCAGTTGCGATCTCAGAGTTTCCGGGCACCCAGTACCCCGCCGGCGGTGGGGAGCTCCGGTGTCGGAGATGGGTTTGACGTGAGGATGAGTTTGAGAGGGAAGAATGGTGGGTGTGTTGTTTTGGAGCTGAACTCTGGGGTTCTGTGTGCGAACTCTGAGTTGTTTGCAGGGTTGATAGAGGATTATAAGAAGAAGGCGTTGAGTGGAAGTAACAAAATGTGTAGAATAGAGGTGCCTGAAGTTGATAACTTGGGAGTTTTCAGAGAAACCATTGAGCTTATGTTCGAGGATGATGTTACCAAAAGGCTTCTCAACATTGGTGTTTATCGATCCATTGATGTTTTGGAGGTGTCGGCAGGCATCATGTTCACTAAGGGTGTTTTGTCCTGTTTACGCTACCTTGAGGCTGTTCCTTGGACTGAAGAAGAAGAAGAAAAATTGAGAAGCCTATTCACAAGATTTAAGTTTGATGATGAAACAACAAGAGACATCCTAGGAAGGCTTTACTTGCACGATTCGGTAGATTCCCAACCAAATGTAGCACAACAACTTGTTTGGTCCATCACCACTTGTGTGGATGCCAATGCAAGAAATGAACTCAAGTCACTAGTCAAGGGTCTTCTTTGCAAAAGCTCAGTTTATGAGAAGAACCACCTTGACCTCAACAAGGAGGATCTATATTCTGTTTGCCACTCATGTTTGGATTCACTTATCAATCTCTTTGAGGAGGCATCTTGCACCATCCCCCCCGAGAGGTTGACAAAGAGAGATATGAATAAGCCACTAATCGAACGCATCTCAAGACAGGTTGATAACATCAATTGGTTACTTGAAATCATGCTTGATGGGCAAATGGCAGAGGACTTTGTGGATATATGGGCAGATCAAGACCAACTGCTTAAAATGCATGATAATGCATCCCCCATGATTAGATACGAACTCAGTAGGGTATCAGCAATTCTTTTTATTGCCATGGCTACTAGGAAACTACAATGCAGGGTGGAAGCTAGATCAGGGCTTCTTGAAGCATGGTTCAGACCTATGCTGTTGGATTTTGGTTGGTTGCAAAGATGCAGAAAAGGGCTTGATATCAAGATCTTGCAAGAGGCTATGGGCCAGACACTTCTAACTCTACCTCTAAAACAACAGCACATGTTGTTCATGGAATGGTTTAGGCACTTCTCAAGCCATGGCACTGAATGTCCAAATCTAAGCAAGACATTCCAAATTTGGTGGCGCAGATCTTTCTTAAGAGGCTCTGAAACTAATGCTATTGAATCAAGGTAA 1530 0.4588 MDHSYRRRRRTWCCSFAVPPASPELRPKSEAQLKPSFSVPSSPQSTKSGSRIVGRIDPRRILSPGRVSPIEDVVPDPSPVPQLRSQSFRAPSTPPAVGSSGVGDGFDVRMSLRGKNGGCVVLELNSGVLCANSELFAGLIEDYKKKALSGSNKMCRIEVPEVDNLGVFRETIELMFEDDVTKRLLNIGVYRSIDVLEVSAGIMFTKGVLSCLRYLEAVPWTEEEEEKLRSLFTRFKFDDETTRDILGRLYLHDSVDSQPNVAQQLVWSITTCVDANARNELKSLVKGLLCKSSVYEKNHLDLNKEDLYSVCHSCLDSLINLFEEASCTIPPERLTKRDMNKPLIERISRQVDNINWLLEIMLDGQMAEDFVDIWADQDQLLKMHDNASPMIRYELSRVSAILFIAMATRKLQCRVEARSGLLEAWFRPMLLDFGWLQRCRKGLDIKILQEAMGQTLLTLPLKQQHMLFMEWFRHFSSHGTECPNLSKTFQIWWRRSFLRGSETNAIESR* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01006 509 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 101 500 IPR038920 -
Rops10g01006 509 MobiDBLite consensus disorder prediction 34 51 - -
Rops10g01006 509 MobiDBLite consensus disorder prediction 21 102 - -
Rops10g01006 509 MobiDBLite consensus disorder prediction 80 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01006 Rops-Chr10 21549934 21552538 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01006 - - gmx:100777771 796.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01006 10 21549934 21552538 Rops10g01006 10 21549934 21552538 ECH
Rops2g00523 2 7618565 7621319 Rops10g01006 10 21549934 21552538 PCT