Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01005 ATGTCGAGTCTCGAGCCGGCACAGACGCTGACTCGGCGGCCGTCGAGAAGCGCCGCCATGACAACGTTCTCGACGGAGGTTTTCGACAACGACGTCGTTCCATCTTCACTCGCTTCTATCTCGCCCATTCTCCGAGTGGCCAACGAGATCGAAAGCGAGCGCCCTAGGGTTGCCTATCTATGTCGATTCTATGCGTTTGAGAAGGCGCACCGGTTGGATCAAAGTTCCAGCGGTCGTGGTGTGAGGCAGTTTAAGACGCTGTTGCTGCAGCGATTGGAGAGGGACAATGCCACCAGTCTTGCAGCTCGGGTTAAGAAGACAGATGCAAGGGAAATCCAGGCTTATTATCAGCAATACTATACGCATTATGTCAGAGCTCTTGACCAAGGAGAGCTGGCGGATAGAGCACAGCTCGGTAAAGCTTACCAGACAGCTGGGGTGCTTTTTGAAGTGCTATGTGCCGTTAACAAGACTGAAAAGGTCGAAGAAGTAGCTCCTGAGATTATTGCGGCTGCAAGAGATGTCCAGGAAAAGACGGAGATTTATGCGCCTTATAACATTCTTCCATTGGATTCTGCAGGGGCTTCTCAGCCTATTATGCAGCTTGAAGAGATTAAGGCAGCTGTTTCTGCACTCTGGAATACTCGTGGCTTGAACTGGCCTAGTTCATTCGAGCATCATCGGCAGAGAACTGGAGATTTGGATCTGCTTGATTGGCTTAGAGCAATGTTTGGGTTTCAGAGGGACAATGTCAGGAACCAGAGAGAACATTTGATTCTGCTTCTTGCTAACTCTCACATAAGGCTACACCCCAAACCTGAGCCTCTCAACAAGCTTGATGATCGAGCGGTTAATGCAGTGATGAATGATCTCTTTAAGAATTACAAAACATGGTGCAAATTTTTGGGACGAAAACATAGTTTACGACTCCCTCAAGGTCAACAAGAGATACAGCAGAGAAAATTACTTTATATGGGCTTGTATCTTCTCATATGGGGTGAAGCATCCAATATTCGCTTCATGCCAGAGTGTCTGTGCTACATATTTCACAATATGGCGTATGAACTTCATGGTTTATTGGCTGGGAATGTGAGCATTGTTACTGGTGAAAATATCAAACCTTCTTATGGTGGTGATGATGAGGCATTCCTGCGCAAGGTTATAACTCCCATATACCGAGTAATTGAAAAGGAAGCCAAGAAGAGCAGAAATGGAACTGCTCCTCACTCGGCCTGGTGTAACTATGATGATCTAAATGAGTACTTCTGGTCACCTGATTGCTTTTCTCTTGGATGGCCCATGCGCGATGATGGTGAATTTTTTAAATCAACACTTAATTTGACACTGGGAAGAAAGGGTGCTCAGAAAAACTCTGGAAGAACGGGCAAATCAAATTTTGTTGAGACCCGGTCATTCTGGCATATCTTCCGCAGTTTAGATCGTCTTTGGACCTTCTATTTACTGGGTTTGCAGGTGATATTCATTATTGCATGGGAAGGGATTTCAGTGACAGAAATCTTTCAGAAAAATGTCTTGTATAAGCTCTCCAGCATATTCATCACTGCAGCCATTCTGCGCTTAATTCAAAGTATCTTGGGCCTGGCTCTGAACTTTCCGGGCTATCATCGTTGGAGATTCACTGATGTGTTACGAAATATTCTCAAAGTCATTGTTAGTCTTTTTTGGGTTATTGTTCTTCCACTCTTATATGTGCATTCCTTCGGTGGTGCCCCTGAGTTTATCAAGAAGTTGCTTTCCTTTCTTCATCAAATAAAGGGGATTCCACCATGGTATATGTTGGCAGTTGCAGTGTATCTGCTTCCAAATTTACTAGCAGCAGTGCTCTTTCTTTTCCCAATGCTCAGGCGTTGGATTGAGAACTCAGACTGGCACATAGTTAGACTCCTCTTATGGTGGTCACAGCCAAGAATCTATGTTGGAAGAGGAATGCACGAGAGTCAATTTGCTCTCCTAAAGTACACTCTTTTCTGGGTGATTCTTTTGGCTGCCAAATTTTCATTCAGCTTTTATGTCCAGATCAAACCTCTAGTTAAGCCAACCAAGGACATAATGAGCATTCGTCATGTTGATTTTGCTTGGCATGAGTTTTTCCCCAGAGCTCAACATAACTATGGTGCAGTTGTTGCACTCTGGGCTCCTGTACTTATGGTTTATTTCATGGACACTCAAATTTGGTATGCCATCTTCTCGACTCTGTGTGGTGGTGTTCTTGGAGCCTTTGATCGTCTAGGAGAGATACGCACTCTGAGCATGTTAAGGTCACGGTTTCAGTCATTGCCTGGTGCATTCAACACATACTTGGTTCCTACTGACAAGAAACACAAAAAGAAGTTCTCATTCTCAAAGCGATTTGTTGAGATTTCTGCAAACAGAAGGAGTGAAGCTGCTAAATTTTCCCAATTATGGAATGAAATCATTTGCAGTTTCCGTGAGGAAGATATTATAAGACTAAATGTCTGTTTGCATGACTCCAGGGAAATGGATCTTTTGTTGGTTCCTTACTCATCAGATCCTAGCCTGAAAATAATTCAGTGGCCACCATTTCTGCTTGCAAGCAAGATTCCTATAGCACTGGATATGGCAGCTCAATTTCGAGGAAGGGACTCTGATCTTTGGAAGCGCATATGTGCAGATGAATATATGAAATGTGCTGTGATTGAATGTTATGAATCTTTTAAAAATGTCCTGCATGCTTTGGTGGTTGGAGAAGCTGAAAAAAGGACAATCTCGGTCATCATAAAGGAAGTCGAAAGCAGCATCTCTAAGAATACGCTTCTTTCAAATTTCCGCATGGGATTTTTGCCTTTCCTTTGTAAGAAGTTTGTGGAGCTTGTGGAAATCTTGAAAGATGCAGATTCATCCAAGCGAGATACGGTGGTGGTCTTGTTGCAAGACATGTTAGAAGTGTTTACTCGTGATATGATGGTGAATGAGATCAGTGAATTGGCAGAGCTTAATCATAGTAGTAAGGATAGTGGAAGACAACTTTTTGCTGGTACTGATGCAAAACCAGCTGTAGTCTTCCCTCCAGTGATTACAGCACAATGGGAGGAACAGATTAGACGTCTTTATTTACTCTTGACAGTAAAAGAATCTGCCATTGAGATTCCAACAAACCTTGAAGCACGCAGAAGGATTGCATTCTTTACCAATTCATTGTTCATGGATATGCCACGTGCTCCACGAGTTCGTAAAATGCTCTCGTTCAGTGTTCTAACTCCATACTACAGTGAAGAGACTGTCTATTCGAAGAATGACCTTGAGGTTGAAAACGAAGATGGTGTGTCAATCATATATTACCTGCAGAAGATCTTCCCTGATGAGTGGAATAACTTCATGGAGCGACTTGATTGTAAAAAAGATAGTGAGATATGGGAGAAAGAAGAGCATGTATTGCAGCTACGTCACTGGGCCTCGTTACGAGGACAAACTCTTTGCAGGACAGTTAGGGGAATGATGTACTACCGGCGAGCTATTAAGCTCCAGGCTTTTCTTGATATGGCTAATGAAAAGGAGATACTTGATGGCTACAAAGCTGTTACTGTCCCATCTGAGGAAGATAAAAAGAGTCATAGATCACTATATGCCAGTTTAGAGGCTATTGCTGACATGAAATTTACATACGTCGCTACCTGTCAGAACTATGGGAATCAGAAGCGTAGTGGTGACCGTCATGCAACAGACATCCTGAATTTGATGGTTAACAATCCCTCGCTTCGTGTGGCATATATTGATGAAGTTGAAGAAAGAGAAGGAGGAAAAGTACAAAAAGTTTATTATTCTGTATTGATCAAAGCTGTGGACAATCTTGACCAAGAAATATTTAGAATTAAACTGCCGGGTCCAGCAAAGTTAGGAGAAGGAAAGCCTGAAAATCAAAATCATGCAATCATTTTTACTAGAGGGGAAGCTCTTCAGACTATCGACATGAACCAGGATAATTACTTGGAAGAAGCTTTAAAAATGCGTAACCTTCTAGAAGAATTTAATGAGGATCATGGGGTGCGGCGACCTACTATATTGGGCGTTCGTGAGCATATCTTTACTGGCAGTGTCTCTTCCTTGGCTTGGTTTATGTCAAATCAAGAAACAAGCTTTGTCACAATTGGTCAAAGAGTTCTTGCAAGACCCCTAAAGGTGCGATTTCACTATGGTCATCCAGATGTTTTTGATAGAATTTTCCACATTACCCGTGGAGGAATGAGCAAGGCTTCTCGTGGCATCAATCTGAGCGAGGATATTTTTGCTGGATTCAACTCTACACTACGACGTGGAAATGTTACTCATCATGAATATATCCAAGTTGGAAAGGGTAGAGATGTTGGGCTCAATCAAATCTCACTTTTTGAAGCAAAAGTGGCTTGTGGTAACGGAGAGCAGACAATAAGCAGAGACATCTACCGGCTGGGGCATCGTTTTGACTTTTTCCGCATGCTATCATTTTATTTTACGACCATTGGATTTTATATCAGCTCAATGATTGTGGTCCTCACGTGCTATGCATTCCTATATGGCAAACTGTACCTGTCATTGAGTGGATTTGAGACTGCAATAGTAAAGTTTGCTAAGAGAAAGGGAGATGATGCTCTAAAGGCAGCAATGGCTTCGCAATCCCTTGTTCAAATAGGACTTATAATGACTTTGCCCATGGTAATGGAAATTGGACTAGAAAGAGGGTTCCGAACCGCTTTAGGTGATTTCATAATAATGCAGTTGCAGCTTGCACCTGTTTTCTTCACTTTCTCACTTGGGACGAAGATGCACTATTTTGGGCGCACTCTCCTGCATGGAGGGGCAAAGTACAGAGCAACTGGGCGTGGTTTTGTCGTTCGCCATGAGAAGTTTGCAGAAAATTACAGGATGTACTCTAGGAGTCACTTTGTAAAAGGGCTTGAGCTCACCATATTGCTCATATGTTATAAAATTTATGGATCAGCAACACCTGATTCAGCAGCATATGGCCTTCTCGCATGGTCAATGTGGTTTTTGGTTTGTTCTTGGTTGTTTTCTCCTTTCATTTTTAATCCATCAGGATTCGAGTGGCAGAAGATAGTTGACGACTGGGATGATTGGAAAAAATGGATAAGTAATCGAGGTGGTATTGGTGTTCCTTCAAACAAGAGCTGGGAATCATGGTGGGATGAGGAGCAGGAGCATCTGCAGCACACTGGGTTTTTGGGGCGGATTTGTGAGATCATTCTTTCCTTGCGTTTCTTTCTCTATCAGTATGGGATTGTGTATCATTTCCATGTAGCCAGAGGTGACAAGAGCATCATGGTTTATGCTCTTTCCTGGATAGTGATAGTAGCTGTCATGGTTATCTTGAAGATTGTGTCCATGGGTAGAAAGAAGTTCAGTGCAGATTTCCAGTTGATGTTTCGTCTTCTCAAATTGTTTCTGTTCATTGGAGCCATTGTCGCTCTGGTCTTAATGTTTACTCTGCTTAGTCTTACGGTTGGAGACATCTTTGCGAGCCTCCTAGCCTTTTTGCCAACAGGATGGGCACTTATACAGGTAGCACAAGCATGCAGGCCATTGGTGAAAGGTATTGGAATGTGGGGGTCAGTGAAAGCTTTAGCAAGGGGCTATGAATACCTGATGGGAGTGATTATTTTTGCACCAGTGGCCATATTGGCATGGTTCCCAATTACTTCAGAATTCCAAACTAGGCTGCTATTCAACCAAGCATTCAGCCGAGGGCTACAAATCCAGCGTATTCTGGCTGGTGGCAAGAAGCATAAGTAA 5766 0.4298 MSSLEPAQTLTRRPSRSAAMTTFSTEVFDNDVVPSSLASISPILRVANEIESERPRVAYLCRFYAFEKAHRLDQSSSGRGVRQFKTLLLQRLERDNATSLAARVKKTDAREIQAYYQQYYTHYVRALDQGELADRAQLGKAYQTAGVLFEVLCAVNKTEKVEEVAPEIIAAARDVQEKTEIYAPYNILPLDSAGASQPIMQLEEIKAAVSALWNTRGLNWPSSFEHHRQRTGDLDLLDWLRAMFGFQRDNVRNQREHLILLLANSHIRLHPKPEPLNKLDDRAVNAVMNDLFKNYKTWCKFLGRKHSLRLPQGQQEIQQRKLLYMGLYLLIWGEASNIRFMPECLCYIFHNMAYELHGLLAGNVSIVTGENIKPSYGGDDEAFLRKVITPIYRVIEKEAKKSRNGTAPHSAWCNYDDLNEYFWSPDCFSLGWPMRDDGEFFKSTLNLTLGRKGAQKNSGRTGKSNFVETRSFWHIFRSLDRLWTFYLLGLQVIFIIAWEGISVTEIFQKNVLYKLSSIFITAAILRLIQSILGLALNFPGYHRWRFTDVLRNILKVIVSLFWVIVLPLLYVHSFGGAPEFIKKLLSFLHQIKGIPPWYMLAVAVYLLPNLLAAVLFLFPMLRRWIENSDWHIVRLLLWWSQPRIYVGRGMHESQFALLKYTLFWVILLAAKFSFSFYVQIKPLVKPTKDIMSIRHVDFAWHEFFPRAQHNYGAVVALWAPVLMVYFMDTQIWYAIFSTLCGGVLGAFDRLGEIRTLSMLRSRFQSLPGAFNTYLVPTDKKHKKKFSFSKRFVEISANRRSEAAKFSQLWNEIICSFREEDIIRLNVCLHDSREMDLLLVPYSSDPSLKIIQWPPFLLASKIPIALDMAAQFRGRDSDLWKRICADEYMKCAVIECYESFKNVLHALVVGEAEKRTISVIIKEVESSISKNTLLSNFRMGFLPFLCKKFVELVEILKDADSSKRDTVVVLLQDMLEVFTRDMMVNEISELAELNHSSKDSGRQLFAGTDAKPAVVFPPVITAQWEEQIRRLYLLLTVKESAIEIPTNLEARRRIAFFTNSLFMDMPRAPRVRKMLSFSVLTPYYSEETVYSKNDLEVENEDGVSIIYYLQKIFPDEWNNFMERLDCKKDSEIWEKEEHVLQLRHWASLRGQTLCRTVRGMMYYRRAIKLQAFLDMANEKEILDGYKAVTVPSEEDKKSHRSLYASLEAIADMKFTYVATCQNYGNQKRSGDRHATDILNLMVNNPSLRVAYIDEVEEREGGKVQKVYYSVLIKAVDNLDQEIFRIKLPGPAKLGEGKPENQNHAIIFTRGEALQTIDMNQDNYLEEALKMRNLLEEFNEDHGVRRPTILGVREHIFTGSVSSLAWFMSNQETSFVTIGQRVLARPLKVRFHYGHPDVFDRIFHITRGGMSKASRGINLSEDIFAGFNSTLRRGNVTHHEYIQVGKGRDVGLNQISLFEAKVACGNGEQTISRDIYRLGHRFDFFRMLSFYFTTIGFYISSMIVVLTCYAFLYGKLYLSLSGFETAIVKFAKRKGDDALKAAMASQSLVQIGLIMTLPMVMEIGLERGFRTALGDFIIMQLQLAPVFFTFSLGTKMHYFGRTLLHGGAKYRATGRGFVVRHEKFAENYRMYSRSHFVKGLELTILLICYKIYGSATPDSAAYGLLAWSMWFLVCSWLFSPFIFNPSGFEWQKIVDDWDDWKKWISNRGGIGVPSNKSWESWWDEEQEHLQHTGFLGRICEIILSLRFFLYQYGIVYHFHVARGDKSIMVYALSWIVIVAVMVILKIVSMGRKKFSADFQLMFRLLKLFLFIGAIVALVLMFTLLSLTVGDIFASLLAFLPTGWALIQVAQACRPLVKGIGMWGSVKALARGYEYLMGVIIFAPVAILAWFPITSEFQTRLLFNQAFSRGLQIQRILAGGKKHK* 1922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01005 1921 SMART FKS1_dom1_2 319 435 IPR026899 -
Rops10g01005 1921 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 321 432 IPR026899 -
Rops10g01005 1921 Gene3D - 25 188 IPR023175 -
Rops10g01005 1921 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 101 1916 - -
Rops10g01005 1921 FunFam callose synthase 3 25 182 - -
Rops10g01005 1921 Pfam 1,3-beta-glucan synthase component 1043 1737 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Rops10g01005 1921 Coils Coil 1319 1339 - -
Rops10g01005 1921 Pfam Vta1 like 39 168 IPR039431 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01005 Rops-Chr10 21523972 21539311 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01005 12 1921 Glycosyltransferase AT1G05570 60.905 0.0 2422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01005 K11000 - gmx:100777245 3516.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01005 10 21523972 21539311 Rops2g00785 2 11240626 11269890 PCT