Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01003 ATGGCGTTCTCTGTGACTCTCTTCCACACCTCTTTCCCTTCCATAACTCAATTTCCACAAACTTTGAGGAGAAAACATGCACATTTCCCATTGATTCGTGCGCAAGCTGGTGAACCAGACAGCTCACAAGCTAAGAGTGAAGGCTCCTCTAATGCTCAGTCTTCAAGTGCTGCCCCTAAGACTCCTAAGAAACCAGTCTATTCCATGAAGAAAGGTCAGATTGTGAGGGTGGACAAGGAGAAATATCTCAATAGCATCAATTATCTTTCTGTTGGGCATCCACCTTATTACAAAGGATTAGACTACATTTATGAAGACCGTGGTGAGGTCCTGGATATGCGTGTGTTTGAAACAGGAGAGCATGCACTTGTTGCATGGGTAGGAGTCCCTACTGCTCCAGCTTGGCTTCCTACATACATGCTTATCAAGTCAGAGAAGCTCAATTATGAGAGGCTATGA 459 0.4466 MAFSVTLFHTSFPSITQFPQTLRRKHAHFPLIRAQAGEPDSSQAKSEGSSNAQSSSAAPKTPKKPVYSMKKGQIVRVDKEKYLNSINYLSVGHPPYYKGLDYIYEDRGEVLDMRVFETGEHALVAWVGVPTAPAWLPTYMLIKSEKLNYERL* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01003 152 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT O, CHLOROPLASTIC 1 152 - -
Rops10g01003 152 Pfam Cyanobacterial and plant NDH-1 subunit O 69 143 IPR020905 GO:0005886|GO:0016655
Rops10g01003 152 MobiDBLite consensus disorder prediction 39 61 - -
Rops10g01003 152 MobiDBLite consensus disorder prediction 36 69 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01003 - - cam:101514807 244.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01003 10 21494194 21495804 Rops10g01003 10 21494194 21495804 ECH