Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01001 ATGAAGCCTTCTTCTCCCGATGATGTTCTTGACGAGGAAAATGGCAAGTTGGAAAAGAGTAGAGAGAGGGTTATGAGAAATAGCAGTGTAGTTAAAGTCCCCAATCAAGCCTTATTATCAGGACTTGCATATTGTCTTTCCTCTTGTGGCATGATATTGATCAACAAGTTTGTACTTTCCAGCTATGATTTTAATGCTGGGATATCCTTGATGTTGTACCAGAATTTCATATCAGTGGTTATTGTTTCTATCTTGTGCCTTCTGGGTTTAGTTTCAACTGAACCACTAACCTGGAGATTGATTAAAGTCTGGTTTCCTGTTAATGTTATATTTGTTGGAATGCTCGTTACAAGCATGTTTAGTTTGAAATACATCAATGTAGCCATGGTGACAGTCCTGAAGAATGTTACTAACGTCATAACCGCCCTTGGTGAAATGTATTTGTTCAAGAAGCACCATGATGGCAGAGTCTGGGCTGCTTTATTTCTAATGATCATTTCAGCTATAACCGGAGGGATTACTGATCTTTCTTTTAATGCAATTGGCTATGCGTGGCAGACACTAAACTGTTTCTTAACTGCATCATATTCTCTGACCCTACGAAGGGTCATGGATACGGCAAAGCAAGTTACCAAATCTGGAAATTTAAATGAGTTTTCGATGGTCTTGTTGAACAATACCCTGTCTTTGCCTTTGGGAATTTTCCTGATTGTTGTTTTCAATGAGGTGGATTATCTCTTAAGAACACCACTTTTGAGATTGCCTAGCTTTTGGTTGGTGATGACCTTCAGTGGAATTTTGGGTCTAGCGATCAGCTTCACATCCATGTGGTTTCTTCATCAGACGGGGGCTACAACTTACAGTCTTGTAGGTTCGTTGAATAAGATACCACTTTCGATTGCTGGCATCCTTCTCTTTAAAGTCCCTACTAGTTTGGAGAACTCTGCAAGCATTTTATTTGGTCTACTGGCAGGAGTGTTTTTTGCTAGAGCCAAAATGAGAGAGAGATCACAATCTTGA 1020 0.3971 MKPSSPDDVLDEENGKLEKSRERVMRNSSVVKVPNQALLSGLAYCLSSCGMILINKFVLSSYDFNAGISLMLYQNFISVVIVSILCLLGLVSTEPLTWRLIKVWFPVNVIFVGMLVTSMFSLKYINVAMVTVLKNVTNVITALGEMYLFKKHHDGRVWAALFLMIISAITGGITDLSFNAIGYAWQTLNCFLTASYSLTLRRVMDTAKQVTKSGNLNEFSMVLLNNTLSLPLGIFLIVVFNEVDYLLRTPLLRLPSFWLVMTFSGILGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSIAGILLFKVPTSLENSASILFGLLAGVFFARAKMRERSQS* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01001 339 PANTHER SOLUTE CARRIER FAMILY 35 38 332 - -
Rops10g01001 339 SUPERFAMILY Multidrug resistance efflux transporter EmrE 81 169 - -
Rops10g01001 339 Pfam Triose-phosphate Transporter family 39 327 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01001 Rops-Chr10 21483960 21489297 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01001 7 287 Organic Solute Cotransporters AT2G13650 78.445 1.76e-153 430
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01001 K15356 - gmx:100808480 588.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01001 10 21483960 21489297 Rops10g01001 10 21483960 21489297 ECH