LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops10g00989	ATGATGACATCATCCTCTGTAGTTCCTGTGCAAAATGGAGGTGTGTCACAGGAGAGTAAGAATGAGGTGGAAGAACAGAGTGAGGTAAAAGAACAGGTGAGTGATATTGATAATAGCAATACTCGGCAGTTTGAAGATAATCCAGGTGATTTGCCTGAGGATGCAACCAAGGAGGACAGCAATGTCACCTCTGAAGATAACTCTAACTTACCAGAAAAACAAGAAGAGAAGTCGGAGGAAAATCCTGTAGAGAAGTCTTCTGAAGATACAAAGACAGAAGATGCGGATAAGAAAACAGGGGATGAAGGTTCGAAGACAGAAAATACTGAATCAAACTCAGAAGATACAGAAAATAGAGAAGATAGCGGTGAGACTCTCACTAAGGAATCTGATTCTGATGATAGTGAAAAGAAAAATGAATCAGATGATAACAAGAAGTCTGATTCAGATGAAAGTGAAAAGAAATATGATAACTCTAATGAAACAACAGATAGTAGGATAGAGGAGAAGGTGGAACGAAGTGATAACAAAGAATCTGATGAAAACTCTAATGAGAAGAATACAGATGACGATGCCAAATCCCAGAGTTCAAATGAGGTATACCCCTCTGGGGCTCAATCAGAGCTGCAAACTGAAAGTACAACACAAACTGGGTCTTGGTCAACTCAGGAAGCAGAGTCAAAGAATGAAAAGGAGTCTCAAGAATCCTCCAAGCAGCCAACTGGGTACAATTGGAAACTTTGCAATGTCACTGCTGGCCCCGACTTTATCCCATGCCTTGACAACTGGAAAGCAATTAAGAGTCTTAGGAGTACTAAACACTATGAACATCGAGAAAGGCACTGTCCTGAAGAACCTCCTACCTGCCTTGTCTCTATGCCCGAAGGATATAAACGCCCAATTGAGTGGCCTAAAAGCAGAGAGAAGATATGGTATTCCAATGTTCCACACACTAAGCTTGCTAAAGTTAAGGGGCACCAGAATTGGGTGAAAGTTACAGGTGAGTACCTTACTTTTCCTGGTGGTGGAACCCAATTCAAGCACGGGGCGCTTCATTACATTGACTTCATACAAGAGTCTGTACCTGACATTGCTTGGGGGAAACGCACGCGTGTTATATTAGATGTTGGATGTGGTGTTGCCAGCTTTGGAGGTTTTCTATTTGACAGGGACGTGCTTGCAATGTCATTTGCACCAAAGGATGAACATGAAGCTCAGGTACAATTTGCTCTTGAAAGGGGGATTCCTGCCATATCTGCTGTGATGGGCACCAAGAGGCTTCCCTTCCCTGGGAAAGTATTTGATGTAGTTCATTGTGCACGATGTAGAGTTCCATGGCATATAGAAGGTGGCAAACTTCTTTTGGAGCTGAATAGAGTATTGCGACCTGGCGGTTTTTTTGTATGGTCTGCTACTCCTATTTATCAGAAGCTTCCTGAAGATGTTGGAATTTGGAATGCCATGAAGGCACTAACAAAAGCAATGTGCTGGGAACTTGTGTCGATCAACAAGGACGAAGTTAATGGAGTTGGTGTAGCAATATTCAAGAAGCCACATTCTAACGAGTGTTACGAGAAACGATCAAAGAATGAGCCTCCATTGTGTCAAGATTCTGATGATCCGAATGGAGCATGGAATATTAAATTGCAAGCTTGCATGCACAAAGTGCCAGTTAGTTCAACAGAACGTGGGTCACAATGGCCTGAGCAGTGGCCAGCCAGACTGACCAATGTACCTTACTGGTTGTCAAGTTCCCAAGTTGGAGTTTATGGAAAGCCTGCCCCTGAAGATTTTACTGCCGATTATAAACATTGGAAACACGCAGTGTCCAAGTCTTATCTAGACGGGATGGGAATTCAGTGGTCAAATGTACGGAATGTCATGGATATGAACTCTATCTATGGAGGATTTGCTGCAGCTTTGAAAGATTTGAATGTTTGGGTCATGAATGTAGTTTCAATAGACTCCCCAGATACTCTTCCCATTATTTATGAACGAGGTCTTTTTGGTATATATCATGATTGGTGCGAATCATTTAGCACCTATCCCAGGTCCTATGATCTCCTCCACGCAGATCATCTATTTTCAAAGATTAAGAAAAGGTGCAAGTTAGCTTCTCTAGTGGCTGAGGTTGATCGGATTCTCAGGCCTGAAGGAAAGCTTATTGTCCGTGACACTGTTGAGATCATTGAGGAGCTTGAGAGCATGGTAAGGTCTATGCAATGGAAGGTTCGCATGACTTACTCCAAGGATAAGGAGGGTTTGTTATGTGTCCAGAAGTCCAAGTGGCGGCCTAAGGAGGTGGAGACACTGCAGTATGCTATTATGTAA	2331	0.4281	MMTSSSVVPVQNGGVSQESKNEVEEQSEVKEQVSDIDNSNTRQFEDNPGDLPEDATKEDSNVTSEDNSNLPEKQEEKSEENPVEKSSEDTKTEDADKKTGDEGSKTENTESNSEDTENREDSGETLTKESDSDDSEKKNESDDNKKSDSDESEKKYDNSNETTDSRIEEKVERSDNKESDENSNEKNTDDDAKSQSSNEVYPSGAQSELQTESTTQTGSWSTQEAESKNEKESQESSKQPTGYNWKLCNVTAGPDFIPCLDNWKAIKSLRSTKHYEHRERHCPEEPPTCLVSMPEGYKRPIEWPKSREKIWYSNVPHTKLAKVKGHQNWVKVTGEYLTFPGGGTQFKHGALHYIDFIQESVPDIAWGKRTRVILDVGCGVASFGGFLFDRDVLAMSFAPKDEHEAQVQFALERGIPAISAVMGTKRLPFPGKVFDVVHCARCRVPWHIEGGKLLLELNRVLRPGGFFVWSATPIYQKLPEDVGIWNAMKALTKAMCWELVSINKDEVNGVGVAIFKKPHSNECYEKRSKNEPPLCQDSDDPNGAWNIKLQACMHKVPVSSTERGSQWPEQWPARLTNVPYWLSSSQVGVYGKPAPEDFTADYKHWKHAVSKSYLDGMGIQWSNVRNVMDMNSIYGGFAAALKDLNVWVMNVVSIDSPDTLPIIYERGLFGIYHDWCESFSTYPRSYDLLHADHLFSKIKKRCKLASLVAEVDRILRPEGKLIVRDTVEIIEELESMVRSMQWKVRMTYSKDKEGLLCVQKSKWRPKEVETLQYAIM*	777

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops10g00989	776	MobiDBLite	consensus disorder prediction	194	224	-	-
	Rops10g00989	776	MobiDBLite	consensus disorder prediction	1	20	-	-
	Rops10g00989	776	MobiDBLite	consensus disorder prediction	47	61	-	-
	Rops10g00989	776	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	594	756	IPR029063	-
	Rops10g00989	776	FunFam	probable methyltransferase PMT23	345	529	-	-
	Rops10g00989	776	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	278	512	IPR029063	-
	Rops10g00989	776	PANTHER	SAM-DEPENDENT METHYLTRANSFERASE	206	764	IPR004159	GO:0008168
	Rops10g00989	776	Pfam	Putative S-adenosyl-L-methionine-dependent methyltransferase	255	760	IPR004159	GO:0008168
	Rops10g00989	776	CDD	AdoMet_MTases	373	468	-	-
	Rops10g00989	776	MobiDBLite	consensus disorder prediction	69	193	-	-
	Rops10g00989	776	Gene3D	Vaccinia Virus protein VP39	343	548	IPR029063	-
	Rops10g00989	776	MobiDBLite	consensus disorder prediction	1	243	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops10g00989	Rops-Chr10	21240785	21246649	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops10g00989	-		-	gmx:100777586	1275.38