Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00947 ATGGACAGGAGGAGTTGGCTTTGGAGCAGGAAGTCATCTGAGAAAAGTCCTGGTGAAACTGAGAGTTCTGGATCAATGTCATCTCATTCAGAAAGATTCTCTGATGATCAGGTATATCCCACCCAAACAACTCTATCTCCAGAAGTCACATCTAAGGCTGCACCAAATGAAGAAGTTAATGATGTGAAGACTCTAACAGAAAGATTATCCGCTGCTCTCTTAGACATTAGTGCCAAAGAAGACTTGGTAACGCAGCATGCTAAAGTTTCTGAAGAAGCTGTCTCAGGCTGGGAGAAGGCTGAAAATGAAGTGTTAACTTTAAAACAACAACTTGATGCTGCAAAACAGAAGAACTCGGTTCTTGAAGACCAAGTTAGTCATCTCAATGGGGCACTCAAGGAGTGTGTGAGGCAACTTCAACAAGCTAAAGAAGAGCAGGAGCAAAAGGTCCATGAAACTGTTGCAAATAACTCTTATGGCTTGGAATCCAAAGGACCTGAGCTTGAGCGGAGAGTTGTTGAGCTTGAGGCTCAACTTCAAACAGCTAAAGCAGATGCTGCTGCATTAGTTAGTTCTGATCTTCACCAGAGGCTTCAGGATGTGGAGAAAGAGAATTCAAGTGTTAAAATTGAACTACAATCTCGACTTGAAGAACTAGAATTCAGAACCATTGAGAGAGATTTCAGTACACAAGCTGCTGAAACCGCAAGCAAGCAACATTTGGAGAGTATAAAGAAGGTGGCTAAGCTTGAAGCTGAGTGCCGTAGATTGAAAGCCATAGCTCGCAAAACATTGTCTGCTAATGATCAAAGGTCTTTGACAGCTTCTTCAGTTTATGTAGAGTCTTTTACAGATAGCATGTCAGATAGTGGAGAAAGGCTACATGTGGTTGAAAATGATATGCACAAATTAGGAGGATGGGAGATGAATGAAGGTGAGCCAAGCCATTATGACTCATGGCCAGAACCCAATCAATTTAAGAATGAAAATGCTAATGTAAAAAATCAAATGGTCCTTTCAACTGAGATCAATCTGATGGATGATTTCCTTGAAATGGAAAGGCTTGCTGCATTGCCAGATACAGAAAGTGTAAGCAGTTATCTTGTGGTAGGTGCTGCATCAGACCAAACTAATGTTGGCCAGGGCCCAAACACACTGAATGCTGAAGTGGAAGCTCTGGTTCAAAAGAATGCTGCATTGGAAAAGAAGCTAGAGAAAATGGAGAAAGAGAAACTTGAGCTAGAGATGGATTTAACCGAGTGCCAAAAGCTGCTTGAGGCATCACAAAACTGGATAAAGGAAGTGGAGTTGGAGGTAGTAGAACTTCAAACTCAGTTAGCTCTTGCAAAGAAATCAAATGAAGAAGCATATCAAGAACTAAAAGCAACCCAGGCAAAGAATGAGATAGCTGAGTCAAAACTCAGAGTTGCTCAAACTGAGGCCGAAGAATTGGTTTCAAAAATTTGTTCATTGGAGGAAGAGATTGAAAAAGAGAGAGCTTTATCTGCTGAGAATTTGGCCAAGTGTGGGAAGTTGGAGGATGAGCTTTTAAGAATGAAGCATGAAGCTCAACTCCACCAAAACACTGATACACTGCATGGGGAAGGTGTTGATAACGAATTAAATTTAAAGCAGGAGAAGGAACTAGCATTGGCTGCTAGTAGATTTGCTGAGTGCCGGAAAACCATTGAATCTCTTGGAATGCAGTTAAAGTCCCTTGCAACATTGGAAGACTTTCTACTTGATTCAGAGAACACTATGGAGTTAACTTGTGAAGTTACACAAGGTCCTCAAAATGGTGGTGAGCAGTTGAAATTACATAATAATGATTTGAGTTTGCCCAAAAGAGATTCTGAATCATCATCTTCACTAAACCCAACTATTACCTATGAAAAAGGCCGTAATAGTTTTGGTAGGTTCTACCCTGTAAGCAAAAGTGTAAGAACAGGAAGTCACAGGAAATGA 1965 0.4092 MDRRSWLWSRKSSEKSPGETESSGSMSSHSERFSDDQVYPTQTTLSPEVTSKAAPNEEVNDVKTLTERLSAALLDISAKEDLVTQHAKVSEEAVSGWEKAENEVLTLKQQLDAAKQKNSVLEDQVSHLNGALKECVRQLQQAKEEQEQKVHETVANNSYGLESKGPELERRVVELEAQLQTAKADAAALVSSDLHQRLQDVEKENSSVKIELQSRLEELEFRTIERDFSTQAAETASKQHLESIKKVAKLEAECRRLKAIARKTLSANDQRSLTASSVYVESFTDSMSDSGERLHVVENDMHKLGGWEMNEGEPSHYDSWPEPNQFKNENANVKNQMVLSTEINLMDDFLEMERLAALPDTESVSSYLVVGAASDQTNVGQGPNTLNAEVEALVQKNAALEKKLEKMEKEKLELEMDLTECQKLLEASQNWIKEVELEVVELQTQLALAKKSNEEAYQELKATQAKNEIAESKLRVAQTEAEELVSKICSLEEEIEKERALSAENLAKCGKLEDELLRMKHEAQLHQNTDTLHGEGVDNELNLKQEKELALAASRFAECRKTIESLGMQLKSLATLEDFLLDSENTMELTCEVTQGPQNGGEQLKLHNNDLSLPKRDSESSSSLNPTITYEKGRNSFGRFYPVSKSVRTGSHRK* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00947 654 Coils Coil 165 192 - -
Rops10g00947 654 Coils Coil 432 487 - -
Rops10g00947 654 Coils Coil 390 424 - -
Rops10g00947 654 MobiDBLite consensus disorder prediction 1 17 - -
Rops10g00947 654 Coils Coil 198 218 - -
Rops10g00947 654 MobiDBLite consensus disorder prediction 1 59 - -
Rops10g00947 654 MobiDBLite consensus disorder prediction 615 632 - -
Rops10g00947 654 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 630 - -
Rops10g00947 654 MobiDBLite consensus disorder prediction 18 53 - -
Rops10g00947 654 Coils Coil 97 156 - -
Rops10g00947 654 Pfam Filament-like plant protein, long coiled-coil 79 265 IPR008587 -
Rops10g00947 654 Pfam Filament-like plant protein, long coiled-coil 382 575 IPR008587 -
Rops10g00947 654 MobiDBLite consensus disorder prediction 594 638 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00947 Rops-Chr10 20704161 20708685 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00947 - - gmx:100810372 899.042