Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00929 ATGGCAGGGGGTCCAAATTCAAAGAGGCTTCAGGCACAGGAAAGAGTGAACAGGAATCTGCAATTGCAACAACCTGTGACGGTTACGGACGAAGATTTCTATGATGGAATCCCACGCTTTCCTCATGATTATTCGTTTGTCCACAAGTCAAGGTCAACGCAGCCATCTACCACAAAGGTCTCAGAGGTGAGTTCATGCCTGGATAGAGCCAGTACTATTGGATATGGGAAGGCAGGGGTTTTGGTTATTCCTGGCAGCAGCATGATGAATTTAAATGCTGGCTGCTGGTTTGTTTCTAGAGCTGCTTCTGGAGCTGCAATAAAGGGGAGTAAAATTTCAATCTTGGCATTTGAGGTTGCAAACACAGTTGTCAAAGGTTTAAATCTTCTGCAATCCCTTTCCACAGAAAGTATTAGACATTTAAAAGAAGAGGTGCTTCTTTCAGAGGCTGTGCAAGATTTGGTATCAAAGGATATGATTGAACTTCTTAGGATTGTTGCTGCTGACAAGAGGCAGGAGTTAAAAGTTTTTTCTGATGCAGTGGTTTGTTTTGGAAACCGTTCAAAGGATCCTCGGTGGCACAACTTAGACCGCTTCTTTGAGATGAATAGCAAAGAATTAAACGCGCCTAGACCTTCAGGAGATGAGGCAGAAATAATAATGCAACAATTGATGACTTTGGTTCAATTTACAGCTGAATTCTACCATGGATTGCTAGCATTGGATAGATTGGATTATGATTGGCGTAAGTGGGAAGAGGAAGATCAAAGAGGTGATGATAGACTTGCATCCTTGAGGGAGATAAAAAGAAAAAGGAAGCAAATTAAGGATTTAAAGAAAAAATCATTCTGGTCTAGAAGTTTGGAGGAGGTTATGGAGAAGCTTGTAAAAATTGTCCTTTATTTGCATTTGGACATAAACAATACCTTCAGCAGCGCAGGTGGCCACAAATCAGTAATTGGACATATGAACAGTAACCAAAGATTGGGCCCAACAGGCCTTGCCTTGCATTATGCAAATATAGTGCTTCAAATTGATAGTCTTGTAGCCAGATCCAGTTTTGTTCCTGCAAATGCAAGGGATACATTATATCAAAGCTTGCCTCCTAATATAAAATCAGCTCTACGTTCCAAATTACCTTCTTTTCATGCTGTAGAAGAGCTAACTGTAGTGGACATAAAAAGTGAGATGGAGAAATCATTACACTGGTTGGTTCCGATTGCCACAAACACATCTAAAGCGCATCATGGTTTTGGTTGGGTAGGGGAGTGGGCAAACTTAGGATCTGAGGTAAATGTGAAGTATTTACAAGCTGGTGTAATACGGATCGAGACATTCCACCATGCGGATAAAGACAAAGTAGACTATTATATTCTTGAACTTCTCTTGTGGCTTCACCGGTTGGTCGTCAAAAGTAAGGCTGGCAGTGATGCTGGCAAAGGGAGGTCTGCCATCAAGTCCCCTGTTGGCGCTACCTTGCAAAAGACAAATAAGCAATCTACACGCCCTGTGACCATTGTTAACAGTCGATGA 1533 0.4181 MAGGPNSKRLQAQERVNRNLQLQQPVTVTDEDFYDGIPRFPHDYSFVHKSRSTQPSTTKVSEVSSCLDRASTIGYGKAGVLVIPGSSMMNLNAGCWFVSRAASGAAIKGSKISILAFEVANTVVKGLNLLQSLSTESIRHLKEEVLLSEAVQDLVSKDMIELLRIVAADKRQELKVFSDAVVCFGNRSKDPRWHNLDRFFEMNSKELNAPRPSGDEAEIIMQQLMTLVQFTAEFYHGLLALDRLDYDWRKWEEEDQRGDDRLASLREIKRKRKQIKDLKKKSFWSRSLEEVMEKLVKIVLYLHLDINNTFSSAGGHKSVIGHMNSNQRLGPTGLALHYANIVLQIDSLVARSSFVPANARDTLYQSLPPNIKSALRSKLPSFHAVEELTVVDIKSEMEKSLHWLVPIATNTSKAHHGFGWVGEWANLGSEVNVKYLQAGVIRIETFHHADKDKVDYYILELLLWLHRLVVKSKAGSDAGKGRSAIKSPVGATLQKTNKQSTRPVTIVNSR* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00929 510 Coils Coil 261 281 - -
Rops10g00929 510 PANTHER OS01G0873900 PROTEIN 10 499 IPR045021 GO:0045927
Rops10g00929 510 MobiDBLite consensus disorder prediction 476 510 - -
Rops10g00929 510 Pfam Protein of unknown function (DUF668) 328 412 IPR007700 GO:0045927
Rops10g00929 510 MobiDBLite consensus disorder prediction 489 510 - -
Rops10g00929 510 Pfam Domain of unknown function (DUF3475) 114 170 IPR021864 GO:0045927
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00929 Rops-Chr10 20430744 20446987 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00929 - - gmx:100779607 597.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00728 2 10269808 10279509 Rops10g00929 10 20430744 20446987 PCT