Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00919 ATGAACTCTCCAACTTCAACTCATGCCCCCTCATCATCACCATCTTCTTCTTCTTCTTCTTCCTCCTATATGTTTCGTTCTCCTCCATGCCTCATCCATGCTTCTCGTAATTTCAAGTTTCAACCTCGGCTGTTGCCACATGCAACCTATATCTCTCAAAAGACGTACCACTGCTCTGGAGCTCATGTGGAGGCTTCTATTAAAACTAATCCCTTGAAAAATTACAAAGCAGCCAGCTTTTCTCCATGGTGGTCTGAAGGACAACCCTTGGTTTCTAACCAAGCACTCAACAAGCACTTGTTCTCTGTGGGAGCTTTAGTAACCCCTACATCTCGAGATGTTTCTGATACAACTCTTATTGGTGATGATAAGATTGGAGTGTTATTGCTAAACCTTGGAGGTCCAGAGACTCTAGAAGACGTGCAGCCTTTTTTGTTTAACCTTTTCGCTGACCCGGATATTATACGATTGCCGAGGATATTTAGTTTTCTTCAAAAGCCATTGGCCCAATTTGTATCTGTTGCAAGGGCCCCAAAGAGCAGAGAAGGCTATGCTTCAATTGGTGGTGGCTCTCCTCTCAGGCGTATAACTGATGCACAGGCTGAAGAATTGAAAAAATCTCTTTGGGAAAAGAATGTCCCTGCTAAAGTGTATGTTGGCATGCGTTACTGGCATCCATTCACTGAAGAAGCTATTGAACAGATTAAAAGGGATGGAATCACGAAGCTTGTCATTCTTCCACTTTATCCACAATTTTCAATATCAACCAGTGGCTCAAGCTTACGTCTACTAGAGAGTATATTCCGACAGGATGAGTATCTAGTCAACTTGCAGCACACAGTAATACCTTCATGGTATCAACGTGAAGGATACATAAAGGCCATGGCAAATTTAATTGAAAAAGAGCTAAAGAGTTTTGACTGCCCTGAGGAGGTCATGATATTCTTTAGTGCACATGGGGTGCCTCTTGCTTATGTGGAACAGGCTGGTGATCCATACAAGGCAGAGATGGAGGAATGTGTGGATTTGATCATGGAGGAACTTGAGACAAGAAAGATAGCTAACGCCTACACCCTTGCTTATCAGAGTAGGGTTGGACCAGTGGAATGGTTAAAACCCTATACAGATGAGACAATAGTTGAACTTGGAAAAAGGGGAGTGAAAAGTATGCTGGCAGTTCCAATTAGCTTTGTCAGTGAACATATTGAAACTCTAGAAGAAATTGATGTTGAATACAAAGAATTGGCTCTACAATCGGGTATAGAAAAGTGGGGCCGTGTTCCTGCTCTAGGATGTGAACCCACCTTCATTTCTGATTTGGCAGATGCTGTTATTGAAAGTCTCCCATATGTTGGTGCAATGGCAGTTTCAAGTCTTGAAGCTCAGCAGTCTATGGTTCCCCTTGGCAGTGTGGAAGAGTTATTGGCAGCATATGACTCAAAACGTAAGGATTTACCACCACCAGTTATAGTATGGGAATGGGGTTGGACAAAAAGTGCTGAAACTTGGAATGGAAGAGTTGCTATGCTTGCTGTGCTTCTTTTTTTGTTTTATGAAGTCACTACAAGTGGGAGTTTTCTGCATCAGTCGGGAATATTTCCCTCCCTTTAG 1611 0.4264 MNSPTSTHAPSSSPSSSSSSSSYMFRSPPCLIHASRNFKFQPRLLPHATYISQKTYHCSGAHVEASIKTNPLKNYKAASFSPWWSEGQPLVSNQALNKHLFSVGALVTPTSRDVSDTTLIGDDKIGVLLLNLGGPETLEDVQPFLFNLFADPDIIRLPRIFSFLQKPLAQFVSVARAPKSREGYASIGGGSPLRRITDAQAEELKKSLWEKNVPAKVYVGMRYWHPFTEEAIEQIKRDGITKLVILPLYPQFSISTSGSSLRLLESIFRQDEYLVNLQHTVIPSWYQREGYIKAMANLIEKELKSFDCPEEVMIFFSAHGVPLAYVEQAGDPYKAEMEECVDLIMEELETRKIANAYTLAYQSRVGPVEWLKPYTDETIVELGKRGVKSMLAVPISFVSEHIETLEEIDVEYKELALQSGIEKWGRVPALGCEPTFISDLADAVIESLPYVGAMAVSSLEAQQSMVPLGSVEELLAAYDSKRKDLPPPVIVWEWGWTKSAETWNGRVAMLAVLLFLFYEVTTSGSFLHQSGIFPSL* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00919 536 ProSitePatterns Ferrochelatase signature. 314 335 IPR019772 GO:0004325|GO:0006783
Rops10g00919 536 NCBIfam ferrochelatase 123 448 IPR001015 GO:0004325|GO:0006783
Rops10g00919 536 MobiDBLite consensus disorder prediction 1 22 - -
Rops10g00919 536 Pfam Ferrochelatase 124 447 IPR001015 GO:0004325|GO:0006783
Rops10g00919 536 Gene3D - 124 447 - -
Rops10g00919 536 SUPERFAMILY Chlorophyll a-b binding protein 492 532 - -
Rops10g00919 536 Gene3D - 286 429 - -
Rops10g00919 536 CDD Ferrochelatase_C 293 431 IPR033644 -
Rops10g00919 536 CDD Ferrochelatase_N 125 287 IPR033659 -
Rops10g00919 536 Hamap Coproporphyrin III ferrochelatase [cpfC]. 123 448 IPR001015 GO:0004325|GO:0006783
Rops10g00919 536 PANTHER FERROCHELATASE 121 474 IPR001015 GO:0004325|GO:0006783
Rops10g00919 536 FunFam Ferrochelatase 124 302 - -
Rops10g00919 536 SUPERFAMILY Chelatase 123 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00919 Rops-Chr10 20341597 20346851 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00919 K01772 - gmx:100785669 901.353
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g00919 10 20341597 20346851 Rops10g00919 10 20341597 20346851 ECH
Rops2g00713 2 10060168 10066766 Rops10g00919 10 20341597 20346851 PCT