Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00918 ATGAGAGTTTCTAACAAATGCTTCTCTTCATCCACTTGTTCGTCTTCTCTCTTCTTTATAGTATTAACTTCACTTGTTCTTGTTTCTTGTTGGAGTCTCTCTCCAACTTTATCATCATTTCTTGTTTCTTGGAGTTGGAGGGAAGAACCAACTTCTTCTTTGTATGTAGAAAGGAAAAGAGCTTCAACATTATATGATGAAGGAGAGGCTCCATCTCCATCTGTATTTCCTTCAGTTCTCATAAAACAAACATCAGAAGCTCAAGGTGGTGAAAAGCTTGACAAGAACTTTAAGCAAAAAGGTTCAAAGAAAACGAACCTTAGAGCTTACAAGTACAGCAAGTTGAAAAGAATTGAAGCAAGATTGGATAAAGCACGGTATTCCATCAAAGAAGCCAGCAAAGTTCGAAATTTGACATCAATCCATCAAGACCCTGATTATGTTCCTCAAGGCCCAATTTACAGAAACGCCAATGCTTTTCATAGGAGTTACCTAGAGATGGAAAAGGTGTTCAAGATTTTTGTGTATGAAGAAGGGGAGCCACCGATGTTTCACAATGGTCTAACCAAAAGCATATACTCCACAGAGGGAAGATTCATAAATGAAATGGAAAAGGGGAGGTACTATCGTACTAATGATCCTGATGAAGCTTTTGTGTATTTTCTTCCCTTCAGTGTGGTTATGATGGTCGAATATGTGTACATGGATGACTTCAATCTGAATCCCATTGGCCTTTCTATAAAAGATTACATACAGGTTATATCCAATAAACATCCCTTCTGGAATAGATCTCTGGGCCATGATCATTTCATGCTCTCTTGCCACGATTGGGGTCCTATTGCATCTGCTTACGTGGATCACGTGTTCAGCAATTCCATAAGGGTTCTTTGCAATGCAAATACATCTGAAGGATTCAAGCCTGCAAAGGATGTGTCATTCCCTGAAATTAATCTCAAGACTGGGGAAATCACAGGTCTAATAGGAGGGTATCCCCCATCTGGTAGGACCATCCTTGCTTTCTTTGCAGGCCACTTGCATGGCCATATAAGATACCTTCTCCTAAATACATGGAAAAACAAAGACCAAGATGTGCGAATCTATGAAGAACTGCCTCAGGATGTTTCCTACTACAGAAAGCTTAGAAGCAGCAAATTTTGCCTGTGTCCAAGTGGTTATGAAGTAGCAAGTCCAAGAATAGTGGAAGCCATATTTGCAGAATGTGTGCCGGTTTTGATTTCTGATAGCTATGTTCCACCCTTTAGTGATGTTTTAAATTGGAAATCATTTTCAGTTCAAATAGATGTGAAGGACATTCCCAATATCAAAAAGATACTGATGGACATTTCACAAAGGCAGTACTTGAGGATGGTGAGGAGACTAAAACAAGTGCAAAGGCATTTTGTGCCTAATGAACCCCCAAAGAGGTTTGATATGTTTCATATGACTATTCATTCCATTTGGCTCAGGAGGTTGAATGTTCATATTCAAGATCAGTAA 1497 0.3921 MRVSNKCFSSSTCSSSLFFIVLTSLVLVSCWSLSPTLSSFLVSWSWREEPTSSLYVERKRASTLYDEGEAPSPSVFPSVLIKQTSEAQGGEKLDKNFKQKGSKKTNLRAYKYSKLKRIEARLDKARYSIKEASKVRNLTSIHQDPDYVPQGPIYRNANAFHRSYLEMEKVFKIFVYEEGEPPMFHNGLTKSIYSTEGRFINEMEKGRYYRTNDPDEAFVYFLPFSVVMMVEYVYMDDFNLNPIGLSIKDYIQVISNKHPFWNRSLGHDHFMLSCHDWGPIASAYVDHVFSNSIRVLCNANTSEGFKPAKDVSFPEINLKTGEITGLIGGYPPSGRTILAFFAGHLHGHIRYLLLNTWKNKDQDVRIYEELPQDVSYYRKLRSSKFCLCPSGYEVASPRIVEAIFAECVPVLISDSYVPPFSDVLNWKSFSVQIDVKDIPNIKKILMDISQRQYLRMVRRLKQVQRHFVPNEPPKRFDMFHMTIHSIWLRRLNVHIQDQ* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00918 498 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 30 - -
Rops10g00918 498 Coils Coil 115 135 - -
Rops10g00918 498 Pfam Exostosin family 168 446 IPR040911 -
Rops10g00918 498 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 27 486 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00918 Rops-Chr10 20335527 20337999 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00918 - - aprc:113868893 830.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g00918 10 20335527 20337999 Rops10g00918 10 20335527 20337999 ECH
Rops2g00679 2 9681673 9685173 Rops10g00918 10 20335527 20337999 PCT