Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00879 ATGGGAACCGGGTCGGATTCAAATGGATGGAACCGTGCTCGAGGGTTGGCGGTGAAGACTCTGCTACTCATCGGTGGTGCACTTCTCATCAAGCGTCTCCGTAAGTCCACCACTCGCTGGGACCATGCTCGTTTCGTCGCTAATTCCCTCTCCGGCCAGAAGTATTCAAAGGAGCAAGCTGCCAGAGACCCTGATAACTATTTCAATATTAGAATGCTTACATGCCCTGCCGCTGAGTTAGTGGATGGTTCCAAGGTCCTCTATTTTGAGCAGGCTTTTTGGAGGAGTCCACAAAAACCCTTTCGTCAGAGGTTTCTTATGGTGAAACCTTGTCCAAAAGAGTTGAAATGTGATGTTGAGTTAAGTACATATGGCATTAGAGACATGGAGGAGTACAAGAATTTCTGTGATCGATCAAAGGATCAGCGTCCACAGCCAGAAGAAGTCATTGGGGATATTGCAGAACATTTGACAACAGTACATCTTAAGCGTTGTGCGCGTGGAAAACGTTGCTTGTATGAAGGTTCAACCCCACCTGGCGGATTTCCTAATTCATGGCAGAATGGGGCAACCTACTGTACTTCAGAACTTGCGGTTATGAAGAACAATGAGATACATACCTGGGATAGGGGTTATGATGACGATGGAAATCAAGTTTGGGGACAAAAGGAAGGTCCATACGAGTTTAAGCCTGCACCAACCTCCGGTTTTAATGATATGTTTTCTCCCTTGAATTTTCCCCCACCACCATCCATGGAGAGAAGAATAGAGGGTTCCTTTATTTTGCAAGAATGA 795 0.4604 MGTGSDSNGWNRARGLAVKTLLLIGGALLIKRLRKSTTRWDHARFVANSLSGQKYSKEQAARDPDNYFNIRMLTCPAAELVDGSKVLYFEQAFWRSPQKPFRQRFLMVKPCPKELKCDVELSTYGIRDMEEYKNFCDRSKDQRPQPEEVIGDIAEHLTTVHLKRCARGKRCLYEGSTPPGGFPNSWQNGATYCTSELAVMKNNEIHTWDRGYDDDGNQVWGQKEGPYEFKPAPTSGFNDMFSPLNFPPPPSMERRIEGSFILQE* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00879 264 CDD CpcT 46 232 IPR010404 GO:0016829|GO:0017009
Rops10g00879 264 Gene3D CpcT/CpeT domain 41 236 IPR038672 -
Rops10g00879 264 PANTHER CHROMOPHORE LYASE CRL, CHLOROPLASTIC 4 264 IPR010404 GO:0016829|GO:0017009
Rops10g00879 264 Pfam CpeT/CpcT family (DUF1001) 46 230 IPR010404 GO:0016829|GO:0017009
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00879 - - ccaj:109806559 531.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g00879 10 19820027 19824047 Rops10g00879 10 19820027 19824047 ECH