Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00878 ATGGCCCTGCACCTGCAGGCACCCTCCACCACCCTACACACTGCAAGGTTCCCATCTTCATTAGCCCCCACTAGCAATGCTGGCCTGCGACCACTCTTCAATCCTTTTGCTTTGAAGTCATCTTTCTTCTCTGGTTCTCTCAGCCTCTTGCTTCATCCTAATCAACAGCATCTTACTTGTGGAGCTCCTAGGATTTCCATGCGTGTGGCTTCCAAGCAAGCCTATATCTGTCGAGATTGCGGGTATATTTACAATGAGAGGACCCCCTTTGAGAAGTTGCCGGATAAATACTTCTGCCCAGTTTGTGGTGCTCCAAAACGAAGGTTTAGATCCTATGCTCCAGCTGTCACGAAAAACGCAAATGCTACAGATGTTAGAAAGGAAAGAAAAGCACAAATCAAAAGAGATGAAGCAATTGGGAACGCACTTCCTATTGCAGTTGCCGTGGGAGTTGCAGTGCTTGCGGGATTATACTTCTATCTGAACGGCAAGTTTTAG 498 0.4719 MALHLQAPSTTLHTARFPSSLAPTSNAGLRPLFNPFALKSSFFSGSLSLLLHPNQQHLTCGAPRISMRVASKQAYICRDCGYIYNERTPFEKLPDKYFCPVCGAPKRRFRSYAPAVTKNANATDVRKERKAQIKRDEAIGNALPIAVAVGVAVLAGLYFYLNGKF* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00878 165 Pfam Rubredoxin 75 109 IPR024935 GO:0005506
Rops10g00878 165 CDD rubredoxin 75 112 IPR024935 GO:0005506
Rops10g00878 165 ProSiteProfiles Rubredoxin-like domain profile. 72 112 IPR024934 GO:0005506
Rops10g00878 165 Gene3D - 72 111 - -
Rops10g00878 165 PANTHER RUBREDOXIN-LIKE SUPERFAMILY PROTEIN 1 163 - -
Rops10g00878 165 SUPERFAMILY Rubredoxin-like 72 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00878 Rops-Chr10 19818282 19819755 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00878 - - gmx:100500575 260.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g00878 10 19818282 19819755 Rops10g00878 10 19818282 19819755 ECH
Rops2g00681 2 9692254 9693770 Rops10g00878 10 19818282 19819755 PCT