Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00876 ATGAATTTTTGGAAGTGGGGTTTCGTTGGTCTTCTTTGTGCTGCTTTTGTTTTTACAATTGGTGCTGTGGAGCTTGGTCGAAATCAGCCCACTGAGAGAATTTCAGGTAGTGCTGGTGATGTGTTAGAAGATGATCCGGTGGGAAGGTTGAAGGTTTTTGTTTATGAACTTCCAAGCAAATATAATAAAAAGATTCTGCAAAAGGACCCAAGATGCCTCACTCATATGTTTGCTGCTGAGATCTTCATGCACCGGTTTCTCTTATCCAGCCCTGTCCGAACCCTTAATCCTGAAGAAGCTGATTGGTTTTATACCCCTGTATATACCACCTGTGACTTGACACCAAATGGCCTCCCTTTACCTTTCAAGTCACCGCGAATGATGAGAAGTGCCATACAGCTTATTTCTTCAAACTGGCCATATTGGAACAGGACAGAAGGGGCAGATCATTTCTTTGTGACCCCTCATGACTTTGGAGCATGCTTCCATTATCAAGAAGAGAAGGCGATTGAGAGAGGAATTCTTTCATTGCTACAGCGTGCTACCTTGGTTCAAACATTTGGACAGAGGAATCATGTGTGTTTGGAAGAGGGCTCAATTACCATTCCTCCATATGCACCGCCACAGAAAATGCATGCGCACCTAATTCCTGAAAACACCCCGAGGTCCATTTTTGTTTACTTCCGAGGACTGTTTTATGATGTTGGAAATGACCCTGAAGGTGGTTACTATGCAAGAGGTGCAAGAGCAGCAGTGTGGGAGAACTTTAAGGACAATCCACTGTTTGACATTTCCACAGAGCATCCAACCACATACTATGAGGACATGCAAAGAGCTGTGTTTTGTTTGTGTCCACTAGGGTGGGCCCCTTGGAGCCCAAGATTGGTTGAAGCTGTGATATTTGGTTGCATCCCTGTTATTATTGCAGATGACATTGTTCTGCCATTTGCTGATGCAATCCCATGGGAAGAGATAGGTGTTTTTGTTGATGAGAAAGATGTCCCTCAGTTAGATACTATACTCACATCCATCCCACCAGAAGTTATCTTAAGGAAACAAAGATTACTTGCCAACCCTTCAATGAAACAAGCTATGTTATTCCCTCAACCTGGACAACCAGGAGATGCTTTCCATCAAGTTTTAAATGGGCTTGCACGTAAATTGCCACATGACAAAAGTGTATTCTTGAAACCAGGTCAAAAGGTCTTGAATTGGACTGCTGGTCCTGTTGGTGACCTTAAACCTTGGTAG 1251 0.4349 MNFWKWGFVGLLCAAFVFTIGAVELGRNQPTERISGSAGDVLEDDPVGRLKVFVYELPSKYNKKILQKDPRCLTHMFAAEIFMHRFLLSSPVRTLNPEEADWFYTPVYTTCDLTPNGLPLPFKSPRMMRSAIQLISSNWPYWNRTEGADHFFVTPHDFGACFHYQEEKAIERGILSLLQRATLVQTFGQRNHVCLEEGSITIPPYAPPQKMHAHLIPENTPRSIFVYFRGLFYDVGNDPEGGYYARGARAAVWENFKDNPLFDISTEHPTTYYEDMQRAVFCLCPLGWAPWSPRLVEAVIFGCIPVIIADDIVLPFADAIPWEEIGVFVDEKDVPQLDTILTSIPPEVILRKQRLLANPSMKQAMLFPQPGQPGDAFHQVLNGLARKLPHDKSVFLKPGQKVLNWTAGPVGDLKPW* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00876 416 Pfam Exostosin family 49 344 IPR040911 -
Rops10g00876 416 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 48 382 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00876 Rops-Chr10 19809982 19814678 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00876 K20870 - gmx:100797122 838.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g00876 10 19809982 19814678 Rops10g00876 10 19809982 19814678 ECH
Rops10g00876 10 19809982 19814678 Rops2g00679 2 9681673 9685173 PCT