Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00817 ATGGGAGCTAGCAAACCCATATCCCCCATTTTCTTGTTCCTTCTTATTGTGTCATGTGTGTTCCTTTACCCAACAAGTTGTGTTTTTGCAACTGCACAACAGAAGCAACCTATCAAAACTGTTGTTGTTTTGGTTATGGAGAACCGTTCCTTTGATCACATGTTGGGGTGGATGAAGAAAGCTTTCAACCCTTTAATCAATGGGGTCACAGGAGATGAATGCAACCCGGTTTCTACTCAAAATCCAAGGCAAGATTCAATTTGCTTCAGTGATGATGCGCAGTTCGTGGATCCAGATCCAGGACATTCATTTGAAGATGTGTTGAAACAGGTATTTGGTTCTGGTTCCATTCCTTCCATGAATGGATTTGTAGAACAAGCATTGTCCATGTCTGAGAAGAATCTCTCTGATACTGTAATGAAAGGGTTCAAACCTGAATCTGTGCCAGTTTATGCCTCTTTGGTTCGTGAATTTGCGGTTTTTGATAGGTGGTTTTCTTCAATTCCTGGTCCAACTCAACCCAATAGGCTTTTTGTGTACTCCGCAACTTCTCATGGTTCAACAAGTCATGTCAAGAAGCAGTTAGCTAAAGGGTATCCACAAAAAACCATATTTGACTCTCTGCATGAGAATGGCTTAGACTTTGGGATTTATTTCCAAAACATACCCACAACTCTGTTCTATAGAAATCTAAGGAAATTGAAATACATATGCAAATTCCATCAGTATGATTTGAAGTTCAAGAGAGATGCTAGAAATGGGAAGCTTCCACCCTTGACTGTGATTGAGCCTAGGTACTTTGATTTGAAGGGCTTGCCAGCAAATGATGACCACCCATCTCATGATGTTGCAAATGGGCAAATGCTGGTTAAAGAGGTTTATGAGGCTCTAAGAGCAAGCCCTCAATGGAATGAAACTCTTTTCATCATTACATATGATGAACATGGTGGGTTTTTTGATCATGTGAAGACTCCTTTTGTCAACATTCCTAGTCCAGATGGGAACACTGGACCTGCTCCTTATTTCTTCAAGTTTGAAAGGTTAGGCGTTCGGGTGCCAACTATTATGGTCTCTCCTTGGATAAAGAAAGGGACTGTGATAAGTGGCGCCCAAGGACCTGCTGAAAACTCCGAGTTTGAGCATTCTTCTATTCCTGCCACCATAAAGAAGATGTTCAACCTTTCCTCTAACTTTTTGACTCACAGAGATGCATGGGCTGGGACATTTGAGCATGTTGTTGGGGAGTTAAGTTCACCCAGAACGGATTGCCCAGTGACTTTGCCGGATGTGACACCTTTAAGGAGCACTGAAGCAAAAGAAAATGCTGGCCTATCTGAGTTTCAGAGTGAGGTAGTTCAATTGGCAGCTGTTCTCAACGGTGATCACTTCTTGAGCAGTTTCCCAGATGAAATGAGCAAGAAGATGAGTGTGAAGGAAGCTCATGAGTATGTGCGTGGAGCTGTTTCAAGATTCTTAAGAGCTAGCAAAGAAGCCATCAAGTTAGGGGCTGATGAGTCTGCTATTGTGGATATGAGATCGTCTCTCACTACCAGATCTTCAATTCACAATTAA 1572 0.4211 MGASKPISPIFLFLLIVSCVFLYPTSCVFATAQQKQPIKTVVVLVMENRSFDHMLGWMKKAFNPLINGVTGDECNPVSTQNPRQDSICFSDDAQFVDPDPGHSFEDVLKQVFGSGSIPSMNGFVEQALSMSEKNLSDTVMKGFKPESVPVYASLVREFAVFDRWFSSIPGPTQPNRLFVYSATSHGSTSHVKKQLAKGYPQKTIFDSLHENGLDFGIYFQNIPTTLFYRNLRKLKYICKFHQYDLKFKRDARNGKLPPLTVIEPRYFDLKGLPANDDHPSHDVANGQMLVKEVYEALRASPQWNETLFIITYDEHGGFFDHVKTPFVNIPSPDGNTGPAPYFFKFERLGVRVPTIMVSPWIKKGTVISGAQGPAENSEFEHSSIPATIKKMFNLSSNFLTHRDAWAGTFEHVVGELSSPRTDCPVTLPDVTPLRSTEAKENAGLSEFQSEVVQLAAVLNGDHFLSSFPDEMSKKMSVKEAHEYVRGAVSRFLRASKEAIKLGADESAIVDMRSSLTTRSSIHN* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00817 523 Gene3D Alkaline Phosphatase, subunit A 269 442 IPR017850 -
Rops10g00817 523 Gene3D Alkaline Phosphatase, subunit A 29 201 IPR017850 -
Rops10g00817 523 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Rops10g00817 523 PANTHER NON-SPECIFIC PHOSPHOLIPASE C4-RELATED 31 494 IPR007312 GO:0016788
Rops10g00817 523 Pfam Phosphoesterase family 38 394 IPR007312 GO:0016788
Rops10g00817 523 FunFam Non-specific phospholipase C1 255 442 - -
Rops10g00817 523 FunFam non-specific phospholipase C6 29 201 - -
Rops10g00817 523 SUPERFAMILY Alkaline phosphatase-like 160 393 IPR017850 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00817 Rops-Chr10 18765977 18768997 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00817 11 518 Acyl Lipid Metabolism Gene Families AT3G48610 78.906 0.0 836
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00817 K01114 - gmx:100786332 966.066