Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00782 ATGACGAAGGAACACAGCCACGACGTCGTTTCCGATTTCATCGACTTCCTGAACGCTTCTCCAACTGCTTTCCACGCCGTCGACGAAGCGAAGAAGCGATTGCAAACAGAGGGTTATGAGCAACTCTCGGAGAACCAAGTATGGGAACTGAAAGCTGGAAACAAGTACTTCTTCACCAGGAACCACTCCACCATCGTCGCCTTCGCCGTCGGCAAAAGATATGTTGCTGGAAATGGATTCCACATAATTGGGGCTCACACTGATAGTCCCTGTCCCAAACTGAAACCGGTGACAAAGGTGGTTAAAGGTGGAATATTGGAGGTTGGTGTCCAAACCTATGGAGGTGGTTTGTGGCATACGTGGTTTGATCGGGATTTGACGGTGGCAGGGAGGGTCCTCTTACGAAATGAGAATGCAGGATCTGTTTCGTACTCGCATCGCCTTGTTAGAATTGAGGAACCCATAATGCGTGTCCCCACTTTGGCAATTCACTTAGACAAGACTGTCAATGATGGATTCAAATTTAACACGCAGACTCATCTTCTTCCCATCCTGGCAACGTCGCTAAAGGCAGAGGTTAATAAAGTGTCCTCTGAAAATGGTTCGCTTGAAAGTGGAAAGCAGAATGATTATAAAACAGGCACTAGCAATACGAAGCACCACCCTCTTCTTCTACAGTTGCTTGCAAGTAAGCTTGGGTGTAAACCGGATGAAATTTGTGATTTTGAATTGCAAGTGTGCGATACGCAACCAAGTGTGGTTGGGGGAGCCGCAAAGGAATTCATATTTTCGGGACGGCTTGATAACCTCTGCATGTCATTTTGCTCATTGAAGGCATTAATAGATGCTACCTCCTCTGACAGCAGTCTTGAGGAAGAGACTGGTGTTAGAATGGTGGCTTTGTTTGACCATGAGGAATGTGGATCAAATTCCGCACAAGGAGCTGGCTCTCCTGTCATGCTAGATGCTTTGTCTAGAGTAACAAATTCCTTCAGCTCAAATCCCAATCTTGTCGAGAAAGCAGTACGAGGAAGTTTCCTTGTATCTGCTGATATGGCTCATGCTCTACACCCCAATTACATGGAAAAGCATGAAGAAAACCATCAGCCCAAACTACATGGAGGACTTGTCATTAAAAACAATGCTAATCAACGCTATGCAACCAATGCTGTCACATCCTTCATATTCAGGGAGATAGCATCAAAACATAACCTTCCCATTCAGGACTTTGTGGTGCGCAATGACATGTCTTGCGGTTCAACCATCGGTCCTATCCTTGCGAGTGGCATAGGTATTCGCACGGTTGATGTGGGGGCACCGCAGTTGTCAATGCATAGCATTCGAGAAATGTGTGCTGTTGATGATGTCAAGTATTCACATGAGCATTTCAAGGCCTTTTTCCGAGAATTCTCTCATCTTGATGCTAAGATTGTCGTGGACATATAG 1446 0.4578 MTKEHSHDVVSDFIDFLNASPTAFHAVDEAKKRLQTEGYEQLSENQVWELKAGNKYFFTRNHSTIVAFAVGKRYVAGNGFHIIGAHTDSPCPKLKPVTKVVKGGILEVGVQTYGGGLWHTWFDRDLTVAGRVLLRNENAGSVSYSHRLVRIEEPIMRVPTLAIHLDKTVNDGFKFNTQTHLLPILATSLKAEVNKVSSENGSLESGKQNDYKTGTSNTKHHPLLLQLLASKLGCKPDEICDFELQVCDTQPSVVGGAAKEFIFSGRLDNLCMSFCSLKALIDATSSDSSLEEETGVRMVALFDHEECGSNSAQGAGSPVMLDALSRVTNSFSSNPNLVEKAVRGSFLVSADMAHALHPNYMEKHEENHQPKLHGGLVIKNNANQRYATNAVTSFIFREIASKHNLPIQDFVVRNDMSCGSTIGPILASGIGIRTVDVGAPQLSMHSIREMCAVDDVKYSHEHFKAFFREFSHLDAKIVVDI* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00782 481 CDD M18_DAP 12 468 - -
Rops10g00782 481 Gene3D Zn peptidases 12 466 - -
Rops10g00782 481 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 434 449 IPR001948 GO:0004177|GO:0006508|GO:0008270
Rops10g00782 481 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 152 169 IPR001948 GO:0004177|GO:0006508|GO:0008270
Rops10g00782 481 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 302 320 IPR001948 GO:0004177|GO:0006508|GO:0008270
Rops10g00782 481 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 80 96 IPR001948 GO:0004177|GO:0006508|GO:0008270
Rops10g00782 481 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 345 361 IPR001948 GO:0004177|GO:0006508|GO:0008270
Rops10g00782 481 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 113 133 IPR001948 GO:0004177|GO:0006508|GO:0008270
Rops10g00782 481 SUPERFAMILY Zn-dependent exopeptidases 3 468 - -
Rops10g00782 481 Gene3D Aminopeptidase i, Domain 2 90 250 IPR023358 GO:0004177
Rops10g00782 481 FunFam Aspartyl aminopeptidase 1 91 251 - -
Rops10g00782 481 PANTHER ASPARTYL AMINOPEPTIDASE 3 480 IPR001948 GO:0004177|GO:0006508|GO:0008270
Rops10g00782 481 Pfam Aminopeptidase I zinc metalloprotease (M18) 16 467 IPR001948 GO:0004177|GO:0006508|GO:0008270
Rops10g00782 481 SUPERFAMILY Aminopeptidase/glucanase lid domain 93 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00782 Rops-Chr10 18273886 18280832 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00782 K01267 - gmx:100781379 842.032