LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops10g00778	ATGCAACTCCTCCAATTCCAAACCCCTTATCTCTTCTTCTCTTTCCCTAAACCCTTAAACCCTTCTCCCTCTCCCCCACATTTTCACCTTCGCCGTCGTCCTCCGCCACTCTCCGGAAACCTCCTCATCACCAAATCCTTCAGCTCCGATGAGTTCCCCGTCGACGAGACCTTCCCGGATAATTTCACCCCACCGGACGACGAGGCCGAGACCGAAGCCCGACGACGCAACTGGATCGAACGCGGTTGGGCTCCATGGGAAGAAATCCTCACACCGGAAGCCGATTTCGCTCGCAAGAGTCTCAACGAAGGTGAAGAGGTTCCTCTCCGTTCACCGGAAGCAATCGAAGCGTTCAAAATGTTAAACCCTAAGTATCGTAAGAAGAAGATGCAGGAAATGGGGTTAACAGAAGAAGAGTATTATGCCAAGCAATTCGAGATTAAAGGAGAGATTCCGGAGCCGTTGGAGACGAAATGGGCGGGGCCGTTGGTGGTGCAGCTTGTGCCACCGCGTGATTGGCCGCCGAGAGGGTGGGAAGTGGATAGGGAGGAATTGGCGTACATTAGAGAAGCGCATAGGATGCAGGGGAGGAGGGTGAGGTTGGAGGAGGTGGAGAATGGAGTGAGGACTGAAACTGATGATGTGTGCTTGGATAGGTATAAGGTGTTTTTGAAGCAATATAAGGAGTGGGTGGAGGCTAATAAGGATAGATTGGAGGAAGAGTCTTATAAGCAAGACCAAGATTATCACCCTGGTAGGAGGAAAAGAGGCAAAGACTACAAGGAAGGCATGTATGAGCTTCCGTTCTATTATCCTGGCCAAATTTGTGTAGGGAAGGTTGTTACTTTGCATCTCTATCAAGGGGCGTTTGTTGACATTGGCGGGGTTTATGATGGGTGGGTTCCTATAAAGAACAATGATTGGTTTTGGATTCGCCATCACATAAAAGTGGGCATGCATGTCATTGTTGAAATTACGGCAAAGCGAGATCCTTATCGCTTCCGGTTTCCGATCGAACTTCGTTTTGTCGATCCAAATATAGATCATCTGATCTTTAACAAATTTGATTTCCCACCAATATTTCACCATGATGAAGATACTAATCCGGATGAATTACGGCGTGACTGTGGAAGACCTCCTGTTCCTAAAAGAGATCCAAAAGACAAGCCAGAGGAAGAACCTCTATTGTCTAATCACCCATATGTCGATAAGTTGTGGCAGATTAATGTGGCTGAGCAAATGATTTTGAATGATATGGAGATTAATCCTGATAAATATAGAGGTAAAAAGCTGTCAGACTTGGTTGATGAAGAAGATTTTGATGAAGAAAATGCTGTTCAGTATTCAAAAGTTCGTTATAAGAATGCAATACTCCCAAGAATCACTCTGAAAACAAGTGTCAAAGAGCTTGACTTAGAGGCTGCACTTGCTGAGCGTGAGTTCCATAATAAACTAAAGAAGGAAGCAGTGGACAGAGGGGAGAAATACGAAGTTCCCAAATTGAGGCGTAATATTGAGATGGATGAATATGATTCCATGCATTGGCGTAGATCATTTGAGGAAAGAGAAGCGTTGATTAGAGACATCAGCAGTCGCAAATCAATTGGACTGCCATTGGAAGAACCAGGAAAGTATGTGGATGCAAGTATTTTAAATAAAGGCAAATATGATCCTGAAAGTCCTCTATATCGTTATGACTACTGGGGGGAACCCAAGAATTCAGAAAAGAGCAGGAAAGAGCGGATGACAGATCGTCATAACAAATCAATTGTGGGCAAGGGAGATGTTTGGTATGACATGTCATATGATGATTACATCAAGCAACGGATGAAAAGAGAAGCCCAGTCCAAGGAACAAAAGGGCAAAGAAGTTAAAGATGAAGATACAAAGCAAGATCAGGGTGCTAAAGATGAGGATGATGATGATGACTACGACGATGACGATGACTTTGACTTAAGCAGTATGCTTAGCAGTCTCGGTAATAATTTCTCTGATCAGCTTCATGTTAATGGGACTGAGTCTTCTAGATTGTCAGACGAGGGCATGTTTGAGGATTGA	2058	0.4456	MQLLQFQTPYLFFSFPKPLNPSPSPPHFHLRRRPPPLSGNLLITKSFSSDEFPVDETFPDNFTPPDDEAETEARRRNWIERGWAPWEEILTPEADFARKSLNEGEEVPLRSPEAIEAFKMLNPKYRKKKMQEMGLTEEEYYAKQFEIKGEIPEPLETKWAGPLVVQLVPPRDWPPRGWEVDREELAYIREAHRMQGRRVRLEEVENGVRTETDDVCLDRYKVFLKQYKEWVEANKDRLEEESYKQDQDYHPGRRKRGKDYKEGMYELPFYYPGQICVGKVVTLHLYQGAFVDIGGVYDGWVPIKNNDWFWIRHHIKVGMHVIVEITAKRDPYRFRFPIELRFVDPNIDHLIFNKFDFPPIFHHDEDTNPDELRRDCGRPPVPKRDPKDKPEEEPLLSNHPYVDKLWQINVAEQMILNDMEINPDKYRGKKLSDLVDEEDFDEENAVQYSKVRYKNAILPRITLKTSVKELDLEAALAEREFHNKLKKEAVDRGEKYEVPKLRRNIEMDEYDSMHWRRSFEEREALIRDISSRKSIGLPLEEPGKYVDASILNKGKYDPESPLYRYDYWGEPKNSEKSRKERMTDRHNKSIVGKGDVWYDMSYDDYIKQRMKREAQSKEQKGKEVKDEDTKQDQGAKDEDDDDDYDDDDDFDLSSMLSSLGNNFSDQLHVNGTESSRLSDEGMFED*	686

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops10g00778	685	SUPERFAMILY	Nucleic acid-binding proteins	269	328	IPR012340	-
	Rops10g00778	685	MobiDBLite	consensus disorder prediction	609	632	-	-
	Rops10g00778	685	MobiDBLite	consensus disorder prediction	569	586	-	-
	Rops10g00778	685	PANTHER	PROTEIN PLASTID TRANSCRIPTIONALLY ACTIVE 10	42	670	IPR044967	GO:0000427\|GO:0003723
	Rops10g00778	685	MobiDBLite	consensus disorder prediction	609	685	-	-
	Rops10g00778	685	MobiDBLite	consensus disorder prediction	366	396	-	-
	Rops10g00778	685	MobiDBLite	consensus disorder prediction	654	677	-	-
	Rops10g00778	685	MobiDBLite	consensus disorder prediction	562	586	-	-
	Rops10g00778	685	MobiDBLite	consensus disorder prediction	633	652	-	-
	Rops10g00778	685	Coils	Coil	607	627	-	-
	Rops10g00778	685	ProSiteProfiles	S1 domain profile.	273	341	IPR003029	GO:0003676

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops10g00778	-		-	gmx:100783002	1080.47

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Rops10g00778	10	18233793	18241865	Rops10g00778	10	18233793	18241865	ECH