Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00764 ATGGGGAAGAAGACGAAGAAGCCAGGGAAAGGGAAAGAGAAAACTGAGAGAAAAACTGCAAAAGCAGAAGTGAAAAGAGCTCGCAGAGACACCAAGAAGCTTTCTCCCGAAGACGACATAGATGCCATTTTGTTAAGTATCCAAAAAGAAGAAGCCAAAAAGAAAGAAGTTCACGTCGAAGACAATGTTCCCGCACCTTCTCCTCGTTCCAACTGCACCCTCACTGTTAATCCCTCGAAAGAGACCGAGTTAATTCTCTATGGTGGTGAATTCTATAACGGAAACAAGACTTTTGTCTATGGCGATCTTTACCGGTATGATGTGGAGAAGATGGAATGGAAATTAATTTCGAGTCCTAATAGTCCTCCTCCTCGCAGTGCTCATCAAGCTGTTGCTTGGAAGAATTATATTTATATTTTTGGTGGTGAATTTACGTCTCCGAATCAAGAGCGGTTCCATCACTACAAGGACTTTTGGATGTTGGACCTGAAAACAAACCAGTGGGAACAGATTAATTTAAAAGGGTGCCCAAGTCCGCGCTCTGGACATCGAATGGTATTATACAAGCACAAGATTATTCTTTTTGGTGGCTTCTATGATACTCTTAGAGAAGTGAGGTACTACAATGATCTATTCGTATTTGACCTTGATCAATTTAAGTGGCAAGAAATAAAGCCTAAGCCTGGAGCGATGTGGCCAACTGCGCGTAGTGGTTTTCAATTATTTGTTTATCAAGATGATATTTTTTTGTATGGTGGCTATTCAAAAGAAGTTTCATCTGATAAGAATGCCTCTGAGAAAGGAATTGTTCATTCAGACATGTGGTCTCTTGATCCTAAGACTTGGGAATGGAACAAGGTTAAGAAAAGCGGAATGCCTCCTGGGCCTCGTGCAGGGTTTTCCATGTGTGTTCATAAGAGGAGGGCTCTGCTTTTTGGTGGTGTTGTGGATATAGAAGTTGAAGGTGATGCAATGATGAGCTTGTTCTTGAATGAGCTTTATGGATTTCAGTTAGACACCAATCGCTGGTATCCTCTGGAGTTAAGAAAGGAGAAGTCGACAAAAGATAAGTTAAAAAAGATTGAACAAAATTGTACTGATGACATCAACAAGAAGAATCAACCATGTACAGCAAGAGAAGAAACAGAGGATTCAGAGTATGAAGAAAGCAACATTGACGATATATCCCAGAATGTTGCATCAAACATGACTATTGTTGATAGTGAAACACTTACCAAACCTGAAGGAAAGTCTAGGGAGTCTGGTGCTAAATCGGACATTCAGAGTTCTTCTTTGCCTGAGGTGGTGAAGCCCTGTGGACGTATTAATTCCTGCGTGGCTGTCGGAAGAGAGACATTATATATATATGGTGGCATGATGGAGATCAAAGATCAAGAAATCACTCTTGATGACTTGTTTTCTCTGAACCTTAGCAAACTTGATGAATGGAAGTGCATTATACCGGCATCAGAATCTGAATGGGTGGAAGCAGAGGATGAGGATGATGATGAAGAAGATGATGATGAAGATGAATCTGATGGTGAAAATACAAGTGATGAGAATGAAGATGATGATGATGATGAGGAGGAGGAGGCTCAGTATGCATCAGTTCAGGTGGGAGATGCTGTTGCCTTACTCAAGGGAGGGGGAAGGAATCTGCGCAGGAAAGAAAGAAGGTCACGGATAGAGCAGATCAGAGCTAGCCTTGGCTTGTCAGATTCACAAAGAACACCATTGCCAGGAGAATCCTTGAGGGATTTCTATAGGCGTACAAATTTGTATTGGCAAATGGCAGCCCATGAGCATACTCAACACACTGGAAAAGAACTCCGCAAGGATGGTTTTGATCTCGCTGAAGCTCGGTATAGGGAGCTAAAACCTATTCTTGACGAGCTGGCTCTATTAGAAGCTGAGCAGAAAGCTGAAGAGGATGAAGGGCCTGAAACTAGTGCAAAGAAAAGAGGCAAGAAGAAAACTAGAAATTGA 1986 0.4189 MGKKTKKPGKGKEKTERKTAKAEVKRARRDTKKLSPEDDIDAILLSIQKEEAKKKEVHVEDNVPAPSPRSNCTLTVNPSKETELILYGGEFYNGNKTFVYGDLYRYDVEKMEWKLISSPNSPPPRSAHQAVAWKNYIYIFGGEFTSPNQERFHHYKDFWMLDLKTNQWEQINLKGCPSPRSGHRMVLYKHKIILFGGFYDTLREVRYYNDLFVFDLDQFKWQEIKPKPGAMWPTARSGFQLFVYQDDIFLYGGYSKEVSSDKNASEKGIVHSDMWSLDPKTWEWNKVKKSGMPPGPRAGFSMCVHKRRALLFGGVVDIEVEGDAMMSLFLNELYGFQLDTNRWYPLELRKEKSTKDKLKKIEQNCTDDINKKNQPCTAREETEDSEYEESNIDDISQNVASNMTIVDSETLTKPEGKSRESGAKSDIQSSSLPEVVKPCGRINSCVAVGRETLYIYGGMMEIKDQEITLDDLFSLNLSKLDEWKCIIPASESEWVEAEDEDDDEEDDDEDESDGENTSDENEDDDDDEEEEAQYASVQVGDAVALLKGGGRNLRRKERRSRIEQIRASLGLSDSQRTPLPGESLRDFYRRTNLYWQMAAHEHTQHTGKELRKDGFDLAEARYRELKPILDELALLEAEQKAEEDEGPETSAKKRGKKKTRN* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00764 661 MobiDBLite consensus disorder prediction 372 431 - -
Rops10g00764 661 SUPERFAMILY Kelch motif 82 485 IPR015915 GO:0005515
Rops10g00764 661 Pfam Galactose oxidase, central domain 135 187 - -
Rops10g00764 661 MobiDBLite consensus disorder prediction 12 35 - -
Rops10g00764 661 MobiDBLite consensus disorder prediction 392 411 - -
Rops10g00764 661 Gene3D - 45 372 IPR015915 GO:0005515
Rops10g00764 661 Pfam Kelch motif 235 297 - -
Rops10g00764 661 MobiDBLite consensus disorder prediction 639 661 - -
Rops10g00764 661 Pfam Galactose oxidase, central domain 444 488 - -
Rops10g00764 661 Pfam Galactose oxidase, central domain 68 122 - -
Rops10g00764 661 PANTHER KELCH DOMAIN-CONTAINING PROTEIN 1 655 - -
Rops10g00764 661 MobiDBLite consensus disorder prediction 493 534 - -
Rops10g00764 661 MobiDBLite consensus disorder prediction 491 538 - -
Rops10g00764 661 Coils Coil 10 30 - -
Rops10g00764 661 MobiDBLite consensus disorder prediction 1 35 - -
Rops10g00764 661 Pfam Domain of unknown function (DUF4110) 570 655 IPR025183 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00764 117 343 Acyl Lipid Metabolism Gene Families AT3G05420 23.750 3.54e-12 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00764 - - gmx:100818228 1121.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g00764 10 18112044 18123123 Rops10g00764 10 18112044 18123123 ECH