Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00753 ATGAAACGGTTTTTCAAAGCAGTGGAGAAAGATTCAGAGGGTAGTTTGAAGAAGCAGAAAGAGAATGAAGAACCGGAAGAGACGAAGAAGGAGCCATTGAAGTTCTTAACTTGGAATGCCAACAGTTTTTTCCTTCGTGTCAAGAATAATTGGCCCCAGTTCACCAGCTTCATCACCAGTTGCGATCCTGATGTTATTGCCATTCAGGAAGTGCGAATGCCTGCTGCTGGAACCAAGGGTGCACCTAAAAATCAGGGAGAAATTAAAGATGATACAACCTCATCCAGGGAAGAAAAAATGATATTGATGCGTGCACTTTCAAATCCACCTTTTGGGAACTATCGTGTTTGGTGGTCTCTCGCAGATTCAAAATATGCAGGGACAGCACTACTTGTGAAAAAATGCTTCAAGCCAAAAAATGTTGTTTTCAATCTTGATAAAATAGCTTCAAAGCATGAACCAGATGGCCGAGTGATCTTAGCTGAATTTGAAACACTTCGTTTATTGAATACATATGTACCAAATAATGGATGGAAAGAGGAGGCAAACTCATTTCAGAGGAGAAGAAAATGGGACAAAAGAATTCTGGAATTTGTTACACAAAATTCAGACAAGCCTTTGATATGGTGTGGGGATCTGAATGTCAGCCATGAAGAGATCGATGTAAGTCATCCAGAGTTTTTCAGTGCAGCAAAACTAAATGGTTATGTTCCTCCAAATAAAGAGGACTGTGGGCAGCCTGGGTTTACCTTGGCTGAAAGAAAACGATTTGGGACCATCTTAAGAGAGGGAAACCTGGTAGATGCCTACAGATTTCTGCACAAGGATAAGGACATGGAGCAAGGTTTCTCATGGTCTGGAAACCCTATTGGGAAGTATCGTGGAAAACGGATGAGAATAGACTACTTTATAGTTTCAGAAAAACTTAAAGAAAGGATTGTTGCATGTGAAATGCATGGACAAGGGATAGAGTTACAAGGTTTCTATGGAAGTGATCATTGTCCAGTTACCTTGGAGCTCTCTCCTAGTTCTGACTCTCAAAATGAGGATCCAGTTTAA 1059 0.407 MKRFFKAVEKDSEGSLKKQKENEEPEETKKEPLKFLTWNANSFFLRVKNNWPQFTSFITSCDPDVIAIQEVRMPAAGTKGAPKNQGEIKDDTTSSREEKMILMRALSNPPFGNYRVWWSLADSKYAGTALLVKKCFKPKNVVFNLDKIASKHEPDGRVILAEFETLRLLNTYVPNNGWKEEANSFQRRRKWDKRILEFVTQNSDKPLIWCGDLNVSHEEIDVSHPEFFSAAKLNGYVPPNKEDCGQPGFTLAERKRFGTILREGNLVDAYRFLHKDKDMEQGFSWSGNPIGKYRGKRMRIDYFIVSEKLKERIVACEMHGQGIELQGFYGSDHCPVTLELSPSSDSQNEDPV* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00753 352 CDD Ape1-like_AP-endo 33 340 - -
Rops10g00753 352 SUPERFAMILY DNase I-like 33 340 IPR036691 -
Rops10g00753 352 PANTHER AP ENDONUCLEASE 19 341 IPR004808 GO:0004518|GO:0006281
Rops10g00753 352 Gene3D Endonuclease/exonuclease/phosphatase 3 342 IPR036691 -
Rops10g00753 352 MobiDBLite consensus disorder prediction 1 29 - -
Rops10g00753 352 FunFam DNA-(apurinic or apyrimidinic site) lyase 6 342 - -
Rops10g00753 352 NCBIfam exodeoxyribonuclease III 33 340 IPR004808 GO:0004518|GO:0006281
Rops10g00753 352 ProSiteProfiles AP endonucleases family 1 profile. 33 342 IPR004808 GO:0004518|GO:0006281
Rops10g00753 352 Pfam Endonuclease/Exonuclease/phosphatase family 36 333 IPR005135 GO:0003824
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00753 - - gmx:100817167 630.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g00753 10 17894264 17899834 Rops10g00753 10 17894264 17899834 ECH