Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00752 ATGGCTATGGCAGCAAGTAGCATCATCTCCATTTCCTTTGCTTCACTCTTGAGTCCAACAACACCTCAACCAAAAACACAAAGCCTCCTAAAACACCATGAACATATTCAAACATCCTCTTTCATGGGAACACTTGCTGCTCTTAAGATATCATCAACACCAACAACATTTGGAGTTGTCACAAGGCGTAGGTTGAGTTGCTCAGCCTCATCATCTTCCTCTTCCACGCTTCCCTCTGCTCTTCTTTTTGACTGTGATGGAGTCCTTGTAGACACTGAGAAAGATGGCCACCGCATATCTTTCAATGAAACCTTCCAAGAGAGAGAACTAGGTGTTACCTGGGACGTGGACTTGTATGGAGAGTTGCTCAAAATTGGAGGTGGAAAAGAAAGGATGACAGCATACTTTAATAAGACAGGTTGGCCTGCAAATGCCCCTACAAGTGAACAAGAAAGAAAAGAATTCATAGCTTCACTCCACAAGCGAAAGACAGAACTCTTCATGGCCCTTATTGAGAAAAAACTGTTGCCTCTTCGCCCAGGTGTTGCAAAGCTTATTGATCAGGCTTTATCTCAAGGAGTCCAAGTTGCTGTTTGCAGCACTTCCAATGAGAAGGCGGTCTCTGCAATAGTATCATTCTTGTTGGGACCTGAGCGAGCAGAAAAAATCAAGATATTTGCAGGAGATGTGGTTCCCCGCAAAAAGCCTGATCCAGCCATCTATATACTGGCAGCCAGCACTCTTGGTGTTGAACCTTCAAGATGTGTGGTGGTGGAGGACAGTGCCATAGGCCTAGCAGCAGCTAAAGCAGCTGGAATGAAGTGTATAATAACAAAGAGCGGCTATACAGCAGATGAAGATTTCTTAAATGCAGATGCAGTATTTGACTTCATTGGTGATCCTCCTGAGGAGAGATTTGATTTGGCATTCTGTGGTAGCCTTCTTGAGAAGCAATATGTCAGCTAG 966 0.4431 MAMAASSIISISFASLLSPTTPQPKTQSLLKHHEHIQTSSFMGTLAALKISSTPTTFGVVTRRRLSCSASSSSSSTLPSALLFDCDGVLVDTEKDGHRISFNETFQERELGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPANAPTSEQERKEFIASLHKRKTELFMALIEKKLLPLRPGVAKLIDQALSQGVQVAVCSTSNEKAVSAIVSFLLGPERAEKIKIFAGDVVPRKKPDPAIYILAASTLGVEPSRCVVVEDSAIGLAAAKAAGMKCIITKSGYTADEDFLNADAVFDFIGDPPEERFDLAFCGSLLEKQYVS* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00752 321 PANTHER XYLULOSE-1,5-BISPHOSPHATE (XUBP) PHOSPHATASE 39 318 IPR044999 GO:0016787
Rops10g00752 321 SUPERFAMILY HAD-like 79 297 IPR036412 -
Rops10g00752 321 Pfam Haloacid dehalogenase-like hydrolase 81 277 IPR041492 -
Rops10g00752 321 SFLD C1.5.6: HAD, Beta-PGM, Phosphatase Like 76 304 - -
Rops10g00752 321 CDD HAD_CbbY-like 83 280 - -
Rops10g00752 321 FunFam HAD family hydrolase 171 294 - -
Rops10g00752 321 NCBIfam HAD-IA family hydrolase 161 277 IPR006439 -
Rops10g00752 321 SFLD phosphoglycolate phosphatase 76 304 - -
Rops10g00752 321 Gene3D Putative phosphatase; domain 2 92 176 IPR023198 -
Rops10g00752 321 Gene3D - 80 296 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00752 Rops-Chr10 17881450 17884908 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00752 - - pvu:PHAVU_009G169900g 503.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g00752 10 17881450 17884908 Rops10g00752 10 17881450 17884908 ECH