Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00750 ATGGCGGAAAAGAAGTTGGGAGCAACAGCAGCAGAAGAGACCTCGAACACGAAGGGTCTTCTTCACCCTACGACATCGAAACTCGTCGTTTTGGCTGACCTCAACGTCGATCCTCCCGAAGCTGAAGCCGAACCCGACGAAGACGATTCTTCACTTGTTCCTCCTCCACAAATCTCCAGGCTGACAGATGAAAACAGTCAAGATAAGAGTTTGTTGTCCAAAGACACTGATAGCATTGAAGGTGAAGGTAAAAAGTTGAACAAACTGGGGAAATGTCGCTCCAGACCTAGCAAGACAGATTCTTCTCTTGATTGTGGAGCTGATGCTGATGGTGATCAACATGTTCATGGGGCTCCTTCATCTCGGGAGGAAAAAGTTAGCAGCATGAAGACTAGAGGGAGGAAGGTGTGTCGCTTGAGGGAGGAAGGGAAGCTTGTTGCTGCCGGAGAAGGAGGGAGGCGTGACTCTGTTCGGGAGGAGCAAAGCTTGTTGTTGCAGGAGAGGGAGGGAGGTGCACCATTGCCAGAGATGGAGGGAGGGACGCTGTCGTTGGAGGTGCAGTGGCCGAGAAGAGAGAAAAACATGCTGGTTGAAAGAACAACAAAGGGCTTGGTTCATGTTGCAAGGAAGATGCCCAAAAATGCTCATGCTCATTTTATACTTGGCTTGATGTACCAAAGATTAAACCAACCTCAAAAGGCTGTATTGGCTTACGAGAAGGCAGAAGAGATCTTACTCAGGCCTGAGACTGAGATTGAGAGGCCAGAGTTGCTTTCCTTAGTTCAGATTCACCATGCACAGTGCCTGATACTAGAAAGTACATCAGAAAATAGTTCAGATAAAGAACTTGAACCTCACGAACTTGAGGAAATTCTTTCTAAACTGAAAGAGTCAGTGCGGTCAGATATCAGACAGGCAGCTGTATGGAATACGCTAGGTTTTATCCTTCTTAAAACTGGTCGTGTGCAGAGTGCTATCTCGGTTTTGTCATCATTGTTGGCCATTGCACCAGAGAACTATGATTGCCTAGGAAATCTTGGGATAGCTTATCTTCAAATTGGGAATTTGGAATTATCCGCAAAATGTTTCCAAGAGTTGATCCTAAAAGATCAAAATCATCCTGCAGCATTGGTCAATTATGCTGCCCTTCTTTTGTGTAAATATGCTTCGGTTGTAGCAGGTGCTGGTGCAAGTGCTGCTGAAGGTGTTTTGGCAGATCAGGTCATGGCTGCTAATGTTGCTAAGGAATGTTTATTAGCTGCAGTTAAAGCAGATAGCAAATCAGCCCATATCTGGGCAAATCTTGCCTACGCATTTTCTATTTGTGGTGATCATCGAAGTTCCAGCAAGTGCTTGGAGAAGGCAGCAAAACTGGAACCCAATTGCATGTCTACTCGATATGCTGTTGCTATCCATCGAATAAAGGAGGCAGAAAGATCTCAAGATCCTAGTGAACTGCTTTCATTAGCTGGAAATGAGATGGCCTCTGTAATAAGAGATGGTGATTCATCCCTGGTTGAGCTTCCCATAGCATGGGCCGGGCTTGCCATGGTTCACAAGGCTCAGCATGAGATAGCAGCAGCATACGAAAGTGAACAACATGGGCTGACAGAAATTGAAGAGCGCGCTGTTTGCAGTTTAAAGCAGGCCATAGCAGAAGATCCAGATGATGCTGTGCAGTGGCACCAACTTGGCGTTCATAGTCTTTGTGCTCGGCAATTCAAAACATCTCAAAAATACTTCAAAGCTGCTGTTGTCTATGACAAGGATCGCAGCTATGCATGGTCTAACCTCGGTGTCTCACTGCAACTATCAGAAGAACCATCACAAGCTGAAAAAGTATATAAGCAAGCTTTGTCTTTGGCAACAACACAACAAGCACATGCTATACTATCCAATCTGGGGATTCTCTATCGCCATCAGAAAAAATATCAACGTGCTAAGGCTATGTTTACAAAGTCACTTGAACTACAGCCTGGCTATGCTCCTGCATTCAACAATCTGGGTCTTGTGTTTGTAGCTGAAGGTCTGTTGGAAGAGGCCAAGTATTGTTTTGAGAAGGCCCTAGAATCAGATCCATTGCTGGATGCAGCTAAGTCTAACTTGGTTAAGGTGGTTACCATGTCGAAGTTATGCAAAAGCCTCTCTTCATGCCATCTTAAAGAATGA 2169 0.4527 MAEKKLGATAAEETSNTKGLLHPTTSKLVVLADLNVDPPEAEAEPDEDDSSLVPPPQISRLTDENSQDKSLLSKDTDSIEGEGKKLNKLGKCRSRPSKTDSSLDCGADADGDQHVHGAPSSREEKVSSMKTRGRKVCRLREEGKLVAAGEGGRRDSVREEQSLLLQEREGGAPLPEMEGGTLSLEVQWPRREKNMLVERTTKGLVHVARKMPKNAHAHFILGLMYQRLNQPQKAVLAYEKAEEILLRPETEIERPELLSLVQIHHAQCLILESTSENSSDKELEPHELEEILSKLKESVRSDIRQAAVWNTLGFILLKTGRVQSAISVLSSLLAIAPENYDCLGNLGIAYLQIGNLELSAKCFQELILKDQNHPAALVNYAALLLCKYASVVAGAGASAAEGVLADQVMAANVAKECLLAAVKADSKSAHIWANLAYAFSICGDHRSSSKCLEKAAKLEPNCMSTRYAVAIHRIKEAERSQDPSELLSLAGNEMASVIRDGDSSLVELPIAWAGLAMVHKAQHEIAAAYESEQHGLTEIEERAVCSLKQAIAEDPDDAVQWHQLGVHSLCARQFKTSQKYFKAAVVYDKDRSYAWSNLGVSLQLSEEPSQAEKVYKQALSLATTQQAHAILSNLGILYRHQKKYQRAKAMFTKSLELQPGYAPAFNNLGLVFVAEGLLEEAKYCFEKALESDPLLDAAKSNLVKVVTMSKLCKSLSSCHLKE* 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00750 722 Gene3D Tetratricopeptide repeat domain 510 629 IPR011990 GO:0005515
Rops10g00750 722 ProSiteProfiles TPR repeat profile. 306 339 IPR019734 GO:0005515
Rops10g00750 722 Gene3D Tetratricopeptide repeat domain 409 494 IPR011990 GO:0005515
Rops10g00750 722 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-CONTAINING PROTEIN-RELATED 203 719 - -
Rops10g00750 722 SUPERFAMILY TPR-like 411 621 IPR011990 GO:0005515
Rops10g00750 722 Pfam Tetratricopeptide repeat 215 244 IPR019734 GO:0005515
Rops10g00750 722 Pfam Tetratricopeptide repeat 429 462 IPR019734 GO:0005515
Rops10g00750 722 Gene3D Tetratricopeptide repeat domain 630 710 IPR011990 GO:0005515
Rops10g00750 722 SUPERFAMILY TPR-like 212 693 IPR011990 GO:0005515
Rops10g00750 722 Pfam Tetratricopeptide repeat 628 690 - -
Rops10g00750 722 MobiDBLite consensus disorder prediction 67 98 - -
Rops10g00750 722 ProSiteProfiles TPR repeat profile. 662 695 IPR019734 GO:0005515
Rops10g00750 722 MobiDBLite consensus disorder prediction 1 134 - -
Rops10g00750 722 SMART tpr_5 558 591 IPR019734 GO:0005515
Rops10g00750 722 SMART tpr_5 429 462 IPR019734 GO:0005515
Rops10g00750 722 SMART tpr_5 628 661 IPR019734 GO:0005515
Rops10g00750 722 SMART tpr_5 306 339 IPR019734 GO:0005515
Rops10g00750 722 SMART tpr_5 592 625 IPR019734 GO:0005515
Rops10g00750 722 SMART tpr_5 509 542 IPR019734 GO:0005515
Rops10g00750 722 SMART tpr_5 340 373 IPR019734 GO:0005515
Rops10g00750 722 SMART tpr_5 662 695 IPR019734 GO:0005515
Rops10g00750 722 SMART tpr_5 215 248 IPR019734 GO:0005515
Rops10g00750 722 MobiDBLite consensus disorder prediction 105 134 - -
Rops10g00750 722 Pfam Tetratricopeptide repeat 316 375 - -
Rops10g00750 722 ProSiteProfiles TPR repeat profile. 628 661 IPR019734 GO:0005515
Rops10g00750 722 Gene3D Tetratricopeptide repeat domain 204 399 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00750 Rops-Chr10 17870021 17880768 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00750 543 694 Glycosyltransferase AT3G04240 25.490 1.20e-08 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00750 - - gmx:100786537 919.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g00750 10 17870021 17880768 Rops10g00750 10 17870021 17880768 ECH