Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00744 ATGGCTACGAGTGGAGGTGAACACAACCCAGCTCTTGACCCGGATTTGGATACTCCGGATAACCCGGATCACGAGTTGGCTCAGTTCGGAGCTGGTTGTTTCTGGGGTGTTGAGTTGGCCTTTCAGCGAGTTGCTGGTGTGGTGAAAACTGAGGTTGGTTATTCACAGGGTCACACCCCGGATCCTAACTACAAACTGGTATGCACCGGATCCACCAACCATGTTGAGGTGGTTCGGGTCCAATTCGACCCGAAAGTTTGTTCCTATGCAAATATCCTCACTCTCTTTTGGTCTCGACATGATCCCACTACCCTCAATCGCCAGGGCAATGATGTGGGTGCACAATATAGATCAGGAATATACTACTACAATGAAACACAGGCTCGTTTAGCCCAAGAATCAAAAGAAGCTAAACAATTGGAACTGAAGGAAAATATTGTGACAGAAATACTTCCAGCAAAGAGGTTTTACAGAGCTGAGGAATACCATCAGCAATATCTGGAAAAGGGTGGAGGCAAAGGCCTCAAACAGTCTGCAGAAAAGGGTTGCACTGATCCAATTAGGTGCTCTGGCTGA 576 0.474 MATSGGEHNPALDPDLDTPDNPDHELAQFGAGCFWGVELAFQRVAGVVKTEVGYSQGHTPDPNYKLVCTGSTNHVEVVRVQFDPKVCSYANILTLFWSRHDPTTLNRQGNDVGAQYRSGIYYYNETQARLAQESKEAKQLELKENIVTEILPAKRFYRAEEYHQQYLEKGGGKGLKQSAEKGCTDPIRCSG* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00744 191 SUPERFAMILY Peptide methionine sulfoxide reductase 20 172 IPR036509 GO:0008113
Rops10g00744 191 Coils Coil 123 143 - -
Rops10g00744 191 Hamap Peptide methionine sulfoxide reductase MsrA [msrA]. 24 181 IPR002569 GO:0008113
Rops10g00744 191 MobiDBLite consensus disorder prediction 1 23 - -
Rops10g00744 191 Gene3D Peptide methionine sulphoxide reductase MsrA 13 191 IPR036509 GO:0008113
Rops10g00744 191 Pfam Peptide methionine sulfoxide reductase 27 170 IPR002569 GO:0008113
Rops10g00744 191 PANTHER PEPTIDE METHIONINE SULFOXIDE REDUCTASE 7 189 - -
Rops10g00744 191 FunFam Peptide methionine sulfoxide reductase 13 191 - -
Rops10g00744 191 NCBIfam peptide-methionine (S)-S-oxide reductase MsrA 26 169 IPR002569 GO:0008113
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00744 Rops-Chr10 17775256 17777013 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00744 K07304 - gmx:100527085 342.813
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g00744 10 17775256 17777013 Rops10g00744 10 17775256 17777013 ECH