LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops10g00733	ATGGCCAGCAACCCTCGTCCCCGAAGTAAGATGGAACAAAGGAAGGAGAGACGCTTGTTCTCAAATTCTGATGATAGTGCCATGATGAAGCAAGTTCAGGCCACTCATGCCCCTGATGGTCGTGAAATTGATGTCAAGCCCATTATCCAAATTGTGGATGAGATCTTGAATCAACTCATTGCTCTCAATGTTGAGGGTCTTGATGAGAAAAAAGAACAAGAATCATTGGAGACTGCTGCAGCTTTGGCTGAATTTGACATGCTTGACTCGCTGGCTTTTATCATAAACAAAATTGCATGCGAGCTATCATGCAAGTGCTCGGGAGGTGGAGATGCACATGCATCAACAATGGTGTTACTGAATTACCTTTCAAGCTATGCATGGCATGCAAAAGTTGTGTTAACCTTAGCAGCCTTTGCTGTTGTTTCTGGGGAGTTTTGGCTTGTTGCTCAGTTGAGTGCTGCAAACACACTTGCCAAATCTGTTGCACTCCTTAAGCAACTTCCTGATATTGTTGAGAATTCTGCATCTTTGAGACCCCAATTTGATGCACTCAATAAGCTGGTGAGGGCAGCACTGGATGTAACCATGTGCATTGTTGAATTCAAGGAGCTACCAACTGAATACATTTCAGAAGATGTGCCTCCTATGTCTGTTGCCAGTGCTCATGTTCCTATTGCTGCTTATTGGGTCATCAGAAGTATTGTGGCTTGTGCCTCACAAATTGCAAGTCTCATAGGCACCAGAAATGAGGCCATTTCATCAGCCTCAGAGGCATGGGAATTATCTAGCCTGGCTCACAAAGTTAGTAGCATACATGAGCACCTCAAGCACCAACTGGAAATTTGCTACCAATATATAGATGAGAAGAGGCAAATGGAGGCCTTCCACAATCTGATACGTCTTTTTGAGACACACCATCTAGACAACATGAAAATTCTCAGAGCCCTGATTTATGCAAAGGATGATATTCCACCACTTATTGATGGAACTACAAAATCAAGGGCTAGTCTCGAGGTACTAAGGAGGAAGCATGTGTTACTGCTCATATCAGATCTTGATCTTTCACAAGAAGAGATTATGGTACTTGACAATTTGTACAAAGATGCAAGATCAAGGGCTGAGACGCACTATGAGATGATATGGATCCCAGTTGTGGAAAAAGCAACATGGAATGAAGTGAACAAGCAAAAGTTTGAGTATTTGCAATCATTGATGGCATGGTACAGTGTTCGTGATCCTTTCATCATTGAACCATCAGTGATTAAGTACATCAAAGAAGTGTGGAATTTCACAAAGAGAGCTATTGTAGTTGCCCTTGATCCACAAGGCAAATTGTCCTCCCCAAATGCTCTCCATATGATATGGATTTGGGGGAATTTGGCCTTCCCATTCACACGTGACAAAGAAGAATCCTTGTGGAAGCAAGAGATTTGGAGCCTTGAACTGCTTGTTGATGGCATTGATCCAACAGTCTTGGAATGGATGGCACAAGGAAAAATCATATGCCTATATGGTGGTGAAGATCTTGAGTGGATTGAAACATTCACTACCACTGCAATGAAAGTTGCAGAAGCTGGTAAGTTTGATTTAGAGATGAGTTACGTGGGAAAGAGCAATGCCAAAGAGAGGATGCAGAGAATGATAGCCACCTTCACCACAAGAAAGTTTAGTTACTTTTGGCCTAATGTCACATCCATTTGGTTCTTTTGGGCAAGATTGGAGAGCATGTTATACTCCAAATTGCAACATGGAAGGACAGTTGAAAATGACAACATCATGAGTGAAGTAATGACTGTGCTTAGCTTTGATGGTAGTGATAGAGGGTGGGCTATATTCTGTAGGGGTGCAAATGAAATGGCAAGAGCCAATGGTGACACTGCTCTAACCAGTTTGAAAGACTTTGATAAGTGGAAGGATAATATTGTTGATGGTGGTTTGGTGCCAGCACTCGATGGTTATTTTCATCAAATTCAGTCCCCTCATCACTGCAATCGTCTCATCCTTCCTGGGAGCACTGGGGGCATACCACAGAAGGTTGTGTGTGCTGAATGTGGCCGTCAAATGGAGAAGTACTTCATGTATCGTTGCTGTGTGGAGTAA	2103	0.428	MASNPRPRSKMEQRKERRLFSNSDDSAMMKQVQATHAPDGREIDVKPIIQIVDEILNQLIALNVEGLDEKKEQESLETAAALAEFDMLDSLAFIINKIACELSCKCSGGGDAHASTMVLLNYLSSYAWHAKVVLTLAAFAVVSGEFWLVAQLSAANTLAKSVALLKQLPDIVENSASLRPQFDALNKLVRAALDVTMCIVEFKELPTEYISEDVPPMSVASAHVPIAAYWVIRSIVACASQIASLIGTRNEAISSASEAWELSSLAHKVSSIHEHLKHQLEICYQYIDEKRQMEAFHNLIRLFETHHLDNMKILRALIYAKDDIPPLIDGTTKSRASLEVLRRKHVLLLISDLDLSQEEIMVLDNLYKDARSRAETHYEMIWIPVVEKATWNEVNKQKFEYLQSLMAWYSVRDPFIIEPSVIKYIKEVWNFTKRAIVVALDPQGKLSSPNALHMIWIWGNLAFPFTRDKEESLWKQEIWSLELLVDGIDPTVLEWMAQGKIICLYGGEDLEWIETFTTTAMKVAEAGKFDLEMSYVGKSNAKERMQRMIATFTTRKFSYFWPNVTSIWFFWARLESMLYSKLQHGRTVENDNIMSEVMTVLSFDGSDRGWAIFCRGANEMARANGDTALTSLKDFDKWKDNIVDGGLVPALDGYFHQIQSPHHCNRLILPGSTGGIPQKVVCAECGRQMEKYFMYRCCVE*	701

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops10g00733	700	MobiDBLite	consensus disorder prediction	1	37	-	-
	Rops10g00733	700	PANTHER	PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE	8	699	IPR039299	GO:0010088
	Rops10g00733	700	Pfam	Sieve element occlusion C-terminus	469	698	IPR027944	-
	Rops10g00733	700	Pfam	Sieve element occlusion N-terminus	23	307	IPR027942	-
	Rops10g00733	700	MobiDBLite	consensus disorder prediction	8	23	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops10g00733	Rops-Chr10	17683483	17686933	Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops10g00733	-		-	gmx:100811452	1192.18

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Rops10g00733	10	17683483	17686933	Rops10g00733	10	17683483	17686933	ECH