Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00732 ATGAGAGAGAGCGGAAAGAAAGTGCGAGAAAGAAAAATGATGCGCTACTACCCTTCCCCTGCCTTGGCGTATGGTTGCCGCTACTGTTATTCCTTTGCAACACGTGCTGTCACACGTGCTCATCATCACTCTCTGTCTTTAACCCTCTCTCACCATCGTCCTCTTTCACTGTCACCCCCTCACTCTTCATCCATCTCAATCATTACCAACCTCTCTTTCTTCCAAAACCCTAATTTCCTCACGGGGAACACACTATTCCTTAAGATGCAGCGATTTTGCTCTGTGAGTGGGATTAGTAAAAACAAAGCAATGGTGGAGAGGTTGCAGCGAAATGGAGTAATCACATCAAGTAAGGTGGCTGAAGTAATGGAAACTATTGATAGAGTTTTGTTTGTGCCTGATGAATCATCAGCTTATGATGATAGTCCCATGGCCATAGGATACAATGCCACTATATCTGCACCGCACATGCATGCCACGTGTCTTCAGTTGCTGGAGGAGCATTTGCTTCCTGGGATGCATGCTCTAGATGTTGGCTCTGGAACAGGGTATCTTACTGCATGCTTTGCCTTGATGGTTGGACCCCAAGGCCGTGCTGTTGGTGTGGAGCACATTCCTGAATTGGTTTCTTATTCAATAGAGAATATTCAGAAAAGTGCTGCAGCTACACTATTGAGAGATGGTTCCCTTTCTGTTCATGTTGGGGATGGAAGGAAAGGTTGGCCAGACTTTGCTCCTTATGATGCCATTCATGTTGGAGCAGCAGCCCCAGAAATTCCTCAAGCACTTATTGACCAGTTGAAGCCTGGTGGTAGAATGGTGATTCCTGTTGGAAACATTTTTCAAGATTTAATGGTGGTGGATAAGAAATCCGATGGTTCTATCAGTTTCCGGACTGAGACCTCTGTTCGTTATGTGCCCCTCACTAGTCGAGAATCTCAACTGAGAGGTTACTAA 957 0.4556 MRESGKKVRERKMMRYYPSPALAYGCRYCYSFATRAVTRAHHHSLSLTLSHHRPLSLSPPHSSSISIITNLSFFQNPNFLTGNTLFLKMQRFCSVSGISKNKAMVERLQRNGVITSSKVAEVMETIDRVLFVPDESSAYDDSPMAIGYNATISAPHMHATCLQLLEEHLLPGMHALDVGSGTGYLTACFALMVGPQGRAVGVEHIPELVSYSIENIQKSAAATLLRDGSLSVHVGDGRKGWPDFAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIPVGNIFQDLMVVDKKSDGSISFRTETSVRYVPLTSRESQLRGY* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00732 318 Gene3D Vaccinia Virus protein VP39 95 318 IPR029063 -
Rops10g00732 318 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Rops10g00732 318 CDD AdoMet_MTases 176 277 - -
Rops10g00732 318 NCBIfam protein-L-isoaspartate O-methyltransferase 99 314 IPR000682 GO:0004719|GO:0036211
Rops10g00732 318 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 97 316 IPR000682 GO:0004719|GO:0036211
Rops10g00732 318 ProSitePatterns Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 235 250 IPR000682 GO:0004719|GO:0036211
Rops10g00732 318 FunFam Protein-L-isoaspartate O-methyltransferase 93 318 - -
Rops10g00732 318 Pfam Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 100 312 - -
Rops10g00732 318 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 101 283 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00732 Rops-Chr10 17663277 17665589 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00732 K00573 - gmx:100810913 491.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g00732 10 17663277 17665589 Rops10g00732 10 17663277 17665589 ECH
Rops2g04082 2 74306144 74308505 Rops10g00732 10 17663277 17665589 PCT