Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00725 ATGATCACTATCCTATTCTTGTTGGTTTGTGTTGGATTTAGTGATGGTGCCAATGGAAGATCCTTGGAAGGGAGAAAAGGGCAGTGGCAATTGCTCCTTAACAACACTGGTGTGGTTGGTATGCATATGGCTTTAACCAACAAAAACACAGTCATAATGTTTGATCAAATTGGAGCTGGCCCTTCTAGTTACCAACTTAGAAAACGTTTCAATGGAAGCAGGTGTACAAGAAGCCATGATGATTTGATGGACTCAACATGTTATGCTCATTCTCTAGAGTATGATATAAGTGCAAATAGAGTTAGACCTTTGAGACTTGACACTGATCCTTGGTGTTCCTCTGGTTCTTTCCTGAGCAATGGAACACTTCTACAAACAGGTGGGTTTGGCAAAGGTGCCAAAAGGGTCAGATTCTATAGACCATGTGGGAACCACCAATGTGATTGGAGACAATCAAAGGAATCTCTTTCTGATGAGAGGTGGTATGCTTCTAGTCAGATACTACCAGAGCATGATAGGGTGGTTGTTGTTGGTGGAAGAAGAGTTTTCACATTTGAATTTGTACCAAAAACTAGTCCTGGTGAAAAATCTTTTAACCTTCCATTCTTGCACCAAACCAATGACAAAAATTCAGGAGGGAACAACCTTTATCCCTTCCTTCACCTTTCATCAGATGGCAACTTGTTCATTTTTGCAAACCGTGATTCAATCCTACTCAACTTGAGACTCAACAGGGTAATCAAAACCTTCCCTAGGATTCCAGGAGATGGTTCAAGAAACTACCCAAGTTCAGGCTCATCTGTGTTACTCCCATTAGACCACAAAGACAACTTCCAGAAAGTTGAAGTTATGATATGTGGAGGTTCTTCAACTGGGGCACTCAAAGCTACAAATAAAGGTAGATTCCTTGAAGGTTTAAGATCATGTGGCAGAATGGTGATCACAGGGAATAACAACAGGTGGGAAATGGAGTACATGCCCAAACCACGTCTCCTACATGACATGCTAATTCTCCCTACTGGTAACATCTTGATTATAAATGGAGCTAAACATGGTTGTGGAGGATATGACAATGCTAGAAATGCATCTCTTGAACCATATCTTTATAGCCCAAATAAAAGACTAGGAAAAAGGTTCAGTGTCCTTAGGTCCACCAAGATAGCAAGAATGTATCACTCATCAGCAACTCTTCTTCCTGATGGGAGGCTCTTAATTGCTGGTGGTAACCCTCATGGGAGGTACACTTTTCACAATGTGGCATACCCAACTGAACTTAGACTTCAAGCATTTGTACCACACTATATGGACAAGAGGTACCATAGCTTGAGGCCTAGTAACTTGACCATAGAATATGGAAGTACAAATAACAGCCATGCAATTGGGTATGGTAGAGATTTTAGAGTTCGGTTTATGCTGAAGAGGAAGCCAAGCAATGAGGTGAAGTTCAGTGCCTATGCTCCACCATTTACAACACATGGCTTTGCCATGAATCAGAAGATGCTGAACCTGAGGTGCAAGAGCATGGTGAGAAGTAATGGGGGGTGGGTTGATGCAGTCTTAGAAGCTCCACCATCAACCAATGTTGCACCTTCTGGTTACTACTTGCTCACTGTTGTCAATGAAGGGATTCCAACGCCGCCACCCCACCGTGAGCTGCAGTCGCCACCGGCTGCCTCGGGAGCCGCTGGGTCTGCCCAGCCGCTGCGCGCCACGTCATCGCCCCGGCCGTCCCGCTGCGTCAAGGCCATCGGAGCTCCTCCGCCGTATGGCGTCGGCCATCGGAGCCTCCGCCAGCCGCCGCAGTCATCTTCTTGTCGCGTGTCACCACCGGCCGAAGCTCCATCCCATCGCGTCTTCAAGGTATGA 1866 0.4555 MITILFLLVCVGFSDGANGRSLEGRKGQWQLLLNNTGVVGMHMALTNKNTVIMFDQIGAGPSSYQLRKRFNGSRCTRSHDDLMDSTCYAHSLEYDISANRVRPLRLDTDPWCSSGSFLSNGTLLQTGGFGKGAKRVRFYRPCGNHQCDWRQSKESLSDERWYASSQILPEHDRVVVVGGRRVFTFEFVPKTSPGEKSFNLPFLHQTNDKNSGGNNLYPFLHLSSDGNLFIFANRDSILLNLRLNRVIKTFPRIPGDGSRNYPSSGSSVLLPLDHKDNFQKVEVMICGGSSTGALKATNKGRFLEGLRSCGRMVITGNNNRWEMEYMPKPRLLHDMLILPTGNILIINGAKHGCGGYDNARNASLEPYLYSPNKRLGKRFSVLRSTKIARMYHSSATLLPDGRLLIAGGNPHGRYTFHNVAYPTELRLQAFVPHYMDKRYHSLRPSNLTIEYGSTNNSHAIGYGRDFRVRFMLKRKPSNEVKFSAYAPPFTTHGFAMNQKMLNLRCKSMVRSNGGWVDAVLEAPPSTNVAPSGYYLLTVVNEGIPTPPPHRELQSPPAASGAAGSAQPLRATSSPRPSRCVKAIGAPPPYGVGHRSLRQPPQSSSCRVSPPAEAPSHRVFKV* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00725 621 Gene3D Immunoglobulins 450 547 IPR013783 -
Rops10g00725 621 CDD E_set_GO_C 460 544 IPR015202 -
Rops10g00725 621 PANTHER SECRETED PROTEIN-RELATED 18 544 - -
Rops10g00725 621 Pfam Galactose oxidase-like, Early set domain 457 544 IPR015202 -
Rops10g00725 621 SUPERFAMILY E set domains 456 545 IPR014756 -
Rops10g00725 621 Gene3D - 23 442 IPR037293 -
Rops10g00725 621 SUPERFAMILY Galactose oxidase, central domain 92 435 IPR011043 -
Rops10g00725 621 Pfam Glyoxal oxidase N-terminus 41 288 IPR009880 -
Rops10g00725 621 MobiDBLite consensus disorder prediction 544 621 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00725 Rops-Chr10 17574700 17576367 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00725 - - gmx:100814200 952.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g00725 10 17574700 17576367 Rops10g00725 10 17574700 17576367 ECH