Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00724 ATGGGTGGATCAATTTCAAAACGGGGGAGTTCAAGGCAACGTTCATCTTCAAGGTCCAGTTCACGTTCCTGGTATCCTCAATATCAATCACCTTATTTGCCACAAAACCAAGATCATGGGTATAACGGGTATCCATCTCAAAGCTATGGTGGTGGTGGTCATGCTTCAGAGCAAAGAAAGGGGTCAGACAGTAAATATTCAAGGATAGGTGATAATTATAATAGCTTGGACCAGGTAACTGAGGCTCTGGCAAATGCTGGCCTAGAGTCTTCCAATCTCATTGTTGGTATTGATTTTACAAAGAGCAATGAGTGGACAGGTGGAAGGTCATTTCAAAGGAGATGCCTGCATCACATCGGGCATGAACAAAATCCATATGAACAAGCTATATCTATCATTGGGAAAACATTGTCTTCCTTTGATGAGGATAACTTAATTCCCTGTTTTGGATTTGGAGATGCATCAACACATGACCAGGAAGTTTTTAGTTTCCATCCTGATGAGAGATTTTGTCATGGATTTGAAGAAGTGTTGGCACGGTACAGGGAATTGGTCCCTCAATTAAAGCTTGCAGGACCTACATCATTTTCCCCAATCATTGAGATGGCAATTACCATAGTTGAGCAAAGTGGAGGCCAGTACCATGTCTTAGTAATCATAGCAGATGGGCAGGTGACAAGAAGTGTTGACACAGAGCATGGCCAGTTGAGTGCCCAAGAAAAGAAAACTGTAGAAGCTATTGTGAAAGCTAGTGAATATCCCCTGTCGATCATATTAGTTGGAGTTGGAGATGGGCCGTGGGACATGATGAAAGAATTTGACGATAACATCCCTGCCCGAGCGTTTGATAATTTCCAGTTTGTGAATTTCACAGAAATAATGTCAAAGAACATGGATCGGTCCAGGAAGGAAGCTGAGTTTGCACTTAAAGCCTTGATGGAAATACCCTCCCAGTACAAGGCAACTCTAGAACTTAATACATTAGGAGCTCGTAGAGGCAAAGATATAGACCGGATTCCTCTGCCGCCACCTCAATATGGTGCAGCATCATCTTTCAACACCCCAAAAACTTCCCGTCAAAACAGTTTTCGTCCCAGTGCACCATCTCAGAGACATGACACTGGCACGAATCCTCCTGCAAGTTCTGCTTCTGATAATCAGGTTTGTCCCATTTGCCTCACAAATCCTAAGGATATGGCTTTTGGTTGCGGGCATCAGACATGCTGTGAGTGCGGACAAGAACTTGAGTTATGCCCCATTTGCAGGAGTACCATTGATACTAGAATAAAACTTTATTAG 1299 0.4319 MGGSISKRGSSRQRSSSRSSSRSWYPQYQSPYLPQNQDHGYNGYPSQSYGGGGHASEQRKGSDSKYSRIGDNYNSLDQVTEALANAGLESSNLIVGIDFTKSNEWTGGRSFQRRCLHHIGHEQNPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEVFSFHPDERFCHGFEEVLARYRELVPQLKLAGPTSFSPIIEMAITIVEQSGGQYHVLVIIADGQVTRSVDTEHGQLSAQEKKTVEAIVKASEYPLSIILVGVGDGPWDMMKEFDDNIPARAFDNFQFVNFTEIMSKNMDRSRKEAEFALKALMEIPSQYKATLELNTLGARRGKDIDRIPLPPPQYGAASSFNTPKTSRQNSFRPSAPSQRHDTGTNPPASSASDNQVCPICLTNPKDMAFGCGHQTCCECGQELELCPICRSTIDTRIKLY* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00724 432 MobiDBLite consensus disorder prediction 1 53 - -
Rops10g00724 432 MobiDBLite consensus disorder prediction 1 68 - -
Rops10g00724 432 SUPERFAMILY vWA-like 91 274 IPR036465 -
Rops10g00724 432 SUPERFAMILY RING/U-box 384 428 - -
Rops10g00724 432 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 368 432 IPR013083 -
Rops10g00724 432 Pfam Zinc finger, C3HC4 type (RING finger) 386 427 - -
Rops10g00724 432 ProSiteProfiles Zinc finger RING-type profile. 389 422 IPR001841 -
Rops10g00724 432 PANTHER COPINE FAMILY PROTEIN 1 12 409 - -
Rops10g00724 432 MobiDBLite consensus disorder prediction 334 385 - -
Rops10g00724 432 Pfam Copine 115 329 IPR010734 -
Rops10g00724 432 SMART VWA_4 90 293 IPR002035 -
Rops10g00724 432 MobiDBLite consensus disorder prediction 347 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00724 Rops-Chr10 17568022 17572447 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00724 K16280 - gmx:100809850 739.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g00724 10 17568022 17572447 Rops10g00724 10 17568022 17572447 ECH