Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00699 ATGGGATGGAATGAGATGAGATGGGGTGGGATGAGGGTGATCAATAATGGTTCTGTGGATTTCATTGGTGAGGTTCGGATTCCAGTAGGTTCAGTTGCTTCCAAGGATAAGCAAACCTTGCAGCCAACGTGGTTCTCCCTTCAAAGTCCCAAGAGTGGGAAATTTTTCAATAAATATTGTGGGAAAATTCTCCTTACAATTTCTCTTCATGGTAAAGGCCATCCTTCTTTTATGAATCATAACCATTCTCCTAATTCAATTATTGCAATTGAGGACTCGAGAGACTTGGAAGGTCTACACATTTCATCTCAGGCACCTTGTTGTAAGATGGGTGAAGGCAAACAGTTCTTGAAGGTTATTGCTAATCGTTTGGATAGGATTTTCAATAAGAAAGAAGGAAACTCAAAACCTGTGGATTTTTCAGAACCATCCATTTCATCATCTGATTATGAAGATAGTGTACAGGAAAATTCATCCCCTTGTGGCTTTAAAGAAGCCATTGCACTGATGGAGTCAAGAGATAACAAACCAGAAAGCCCTGAAAATTTGCAGGGTGGTATTCTAGTTGATCAGATTTATGCAGTGTCTCCATATGATCTTAATGTATTTCTTTTTGCACCCAATTCACAGTTTAGGAAAGATATGGCAGAACTACAGGGAACAACTAATATGCAAGAGGTGCCTTGGACATGGAAAGCTGGAGACATGTCTTGTTTGACAAGAGTTGTTTCCTATACAAAAGCTGCTACAAAATTAGTTAAGGCTGTGAATGCCATTGAGGAGCAAACCTACATTAGAGTGAGTAAAGAGGAAATTGCTGTATTTGTTAGTGTAAGCACACCTGAGGTCCCATATGGGAATACATTTAGAGTTGAATTGCTTTATAAGATAATGCCAGAAGGAGAGGCATTTTCTGGAGAGGAATCTTCCCATCTTGTGGTATCCTGGGGCATTGTCTTCTTCCATAGGACAATGATGAAAGGCATTATAGAAAGTAGGACTAGACAGGGATTGAAGGAGAGTTTTGACCAGTTCTCCAATCAACTTGCTCAGAATTTCAAGGTGCTAGATAAGGCAGATTTATCAGACAAGGAACATTTGTTAGCAACTTTGCAAGCAGAAGACCAGTGGCATTGGTGGCAGGCAATCAAATACTTTTGGAATTTCACTGTAGTTTCCACCTTTTTCATGTTTTTGTATGTGTTGGTGCATATTTTAAGGTGTGGTCCAAGTCAACCTCAGGGCTTGGAATTTAGGGGGATTGAATTGCCAGATAGCTTTGGAGAGCTTGTTACAAGTGGAATTTTAATCATCCAGTTGCAGCGTGTTTATAATATGGTCTCTCACTTTGTGCAAGCTAGATTTCAAATAGGAACTGACCATGGCCTGAAAGCCCATGGTGATGGATGGGTTCTAACTGTGGCTTTAATTGAGGGTGTTGACCTGGCTTCATTGGAATCAACAGGGTTGTCAGATCCCTATGTGGTTTTCACCTGTAATGGACAAACAAGGTCAAGTTCTGTAAAGCTTCAAATATCGAATCCTCAATGGAATGAGATACTAGAGTTTGATGCCATGGAAGAACCGCCATCAGTTTTAGATGTGGAAGTTTTTGATTTTGATGGTCCATTTGACCAGGATGTTTCTCTTGGACATGCTGAGATCAATTTCCTAAAGCACACATCAACAGAATTGGCAGACATGTGGGTCATGCTTGAGGGAAAGCTTGCTCAGTCTTCTCAATCAAAGTTGCATTTGAGAATTTTCTTAGACAATAATAACGGAGTTGAAACAATCAAGGAATATTTGGAGAAGAAGGAAAAGGAAGTAGGCAAAAAGTTGAATCTTCGATCACCTCAAAGGAATTCTACATTCCAGAAATTGTTTGGGTTGCCTCCAGAAGAATTTCTCATCAATGATTTCACATGTTACCTGAAGAGAAAAATGCCTTTACAGGGTCGGCTGTTTCTTTCGGCAAGGATTCTGGGGTTTTATGCCCATTTTTTTGGACATAAAACCAATTTTTTTTTCCTTTGGGAAGATATTGAAGAAATTCAAGCGCTTCCTCCATCGTTGGCATCATTAGGAAGCCCTACATTGGTCATAATTCTTCGAACAGGTCGAGGTATTGATGCAAGGCATGGTGCAAAGACTCAAGATGAAGAAGGAAGACTTAGGTTTCATTTTCAATCATTTGTTTCATTTAGTGCTGCCTCCAGAACTGTAATGGCCTTGTGGAGAACAAGAATACTGAATCCCTATCGGAAAGAACAACTTACAGAAGACCATGAAGATCAAGAAGGCTTTGTAATTCCTGAAGCCTCTGGATCTATCCTAGAGGATGAAGCAAAAATGTCCAAGATTTACTCTGCAGAACTTCCAATTAAGATGAGATCAGTGATGGGAATTTTTGATGGAGGAAACCTGGAGCATAAAATCATGAAAAGAACTGGATTTATGAACTATGAAACTACAGCTTGGGAACTAGTAAAGCCTGATGTCTTCGAAAGGCGTGTTTCTTACCAATTCAATCGGCATGTGTTGCTTTTTGGTGAAGTCACATGCACACAACAAAAATCTTCAAATGCTAACACTGAAGGCTGGATTGTAAATGAAGTTATGGCCCTTCATGGTGTCCCATTTGCTGATCACTTCCGTATTCATTTTAGGTACGAAATTGAGAAATCAGCTCTTGGTGACTGTGCTTGCAAGTGTGATGCATACATTGGTATTATTTGGCTTAGGAGCTCTAAGTTTCAGCAAAGAATCAACCGGAACATAACGGCCAAGTTTAACATTCGATTGAAGGAAATATTTGAACTGCTTCAGAAAGAGATTTTGTTGATGTCTCAGAACTCACATGGGAATGTTATTTCTTGA 2880 0.3969 MGWNEMRWGGMRVINNGSVDFIGEVRIPVGSVASKDKQTLQPTWFSLQSPKSGKFFNKYCGKILLTISLHGKGHPSFMNHNHSPNSIIAIEDSRDLEGLHISSQAPCCKMGEGKQFLKVIANRLDRIFNKKEGNSKPVDFSEPSISSSDYEDSVQENSSPCGFKEAIALMESRDNKPESPENLQGGILVDQIYAVSPYDLNVFLFAPNSQFRKDMAELQGTTNMQEVPWTWKAGDMSCLTRVVSYTKAATKLVKAVNAIEEQTYIRVSKEEIAVFVSVSTPEVPYGNTFRVELLYKIMPEGEAFSGEESSHLVVSWGIVFFHRTMMKGIIESRTRQGLKESFDQFSNQLAQNFKVLDKADLSDKEHLLATLQAEDQWHWWQAIKYFWNFTVVSTFFMFLYVLVHILRCGPSQPQGLEFRGIELPDSFGELVTSGILIIQLQRVYNMVSHFVQARFQIGTDHGLKAHGDGWVLTVALIEGVDLASLESTGLSDPYVVFTCNGQTRSSSVKLQISNPQWNEILEFDAMEEPPSVLDVEVFDFDGPFDQDVSLGHAEINFLKHTSTELADMWVMLEGKLAQSSQSKLHLRIFLDNNNGVETIKEYLEKKEKEVGKKLNLRSPQRNSTFQKLFGLPPEEFLINDFTCYLKRKMPLQGRLFLSARILGFYAHFFGHKTNFFFLWEDIEEIQALPPSLASLGSPTLVIILRTGRGIDARHGAKTQDEEGRLRFHFQSFVSFSAASRTVMALWRTRILNPYRKEQLTEDHEDQEGFVIPEASGSILEDEAKMSKIYSAELPIKMRSVMGIFDGGNLEHKIMKRTGFMNYETTAWELVKPDVFERRVSYQFNRHVLLFGEVTCTQQKSSNANTEGWIVNEVMALHGVPFADHFRIHFRYEIEKSALGDCACKCDAYIGIIWLRSSKFQQRINRNITAKFNIRLKEIFELLQKEILLMSQNSHGNVIS* 960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00699 959 ProSiteProfiles VASt domain profile. 784 946 IPR031968 -
Rops10g00699 959 Pfam VAD1 Analog of StAR-related lipid transfer domain 788 927 IPR031968 -
Rops10g00699 959 Pfam VAD1 Analog of StAR-related lipid transfer domain 188 337 IPR031968 -
Rops10g00699 959 ProSiteProfiles C2 domain profile. 451 570 IPR000008 -
Rops10g00699 959 CDD C2 472 572 - -
Rops10g00699 959 Pfam C2 domain 471 570 IPR000008 -
Rops10g00699 959 Gene3D - 621 748 IPR011993 -
Rops10g00699 959 ProSiteProfiles VASt domain profile. 184 357 IPR031968 -
Rops10g00699 959 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 470 595 IPR035892 -
Rops10g00699 959 SMART gram2001c 623 689 IPR004182 -
Rops10g00699 959 MobiDBLite consensus disorder prediction 132 153 - -
Rops10g00699 959 Pfam GRAM domain 624 698 IPR004182 -
Rops10g00699 959 Gene3D C2 domain 456 590 IPR035892 -
Rops10g00699 959 PANTHER BNAA05G37250D PROTEIN 18 947 IPR044511 -
Rops10g00699 959 MobiDBLite consensus disorder prediction 139 153 - -
Rops10g00699 959 SMART C2_3c 471 570 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00699 Rops-Chr10 17176510 17184889 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00699 472 547 Lipid Metabolism Gene Families AT5G17980 34.211 4.48e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00699 - - gmx:100811103 1604.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g00699 10 17176510 17184889 Rops10g00699 10 17176510 17184889 ECH