Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00694 ATGGCCTCAGCTTCGCAAAAGACGACGACACCAACGTCTTCCTCTTGTTGTCCCTCCGGCGACTCTTCCAGCTTAGCCGTCGTCGCAGCCGCCGCCTCGCAGCAGCAAGAATGGACCGCCGACGATCGCCGCGCCTTGATTCGCCCTCTCGATTCGCTTCCAGAATCTTCCACCAATGCCCCTTCTACTAAGGGAATCACTACTATGACAAGGGCCCAGTCAAGCCACCCTTTGGATCCTTTATCTGCTGCTGAGATCTCTGTGGCAGTTGCAACTGTGAGGGCTGCTGGAGCCACTCCTGAGCTTAGAGATAGTATGCGCTTCATTGAAGTAGTTTTACTGGAACCAGATAAACATGTTGTGGCTCTGGCAGATGCTTATTTCTTTCCACCTTTCCAACCATCATTACTTCCTAGAACTAAAGGAGGAGGGCCTGTGATTCCCACTAAACTCCCTCCAAGATGTGCTAGACTGGTCGTTTACAATAAGAAATCAAACCAGACTGCTATATGGATTGTTGAATTATCGCAAGTACATGCAGTGACTCGAGGTGGTCATCACCGAGGAAAAGTAATTTCGTCGCATGTTGTACCTGATGTTCAGCCTCCAATGGATGCTGTGGAATATGCAGAATGTGAGGCTGTCGTTAAAAGTTTTCCCCCATTTATAGAGGCTATGAAGAAAAGGGGTATTGAAGACATGGACCTTGTAATGGTTGATCCCTGGTGTGTTGGTTATTACAGTGAAGCTGATGCTCCCGGTCGAAGACTTGCTAAACCACTCATATTTTGTCGGTCTGAGAGTGACTGCCCAATGGAAAATGGCTATGCCCGCCCAGTCGAGGGCATCTATGTTCTTGTTGATATGCAAAACATGGTGGTGATAGAGTTTGAAGACCGTAAACTTGTTCCTCTGCCTCCAGTTGATCCCTTGAGGAATTATACTCCTGGAGAAACCAGAGGTGGCTCTGATAGAAGTGATGTAAAACCCTTGCAAATTATTCAGCCTGAAGGTCCAAGCTTTCGTGTCAATGGGTATTATGTTGAATGGCAGAAGTGGAATTTTCGTATTGGGTTCACACCCAAAGAAGGTTTGGTTATATATTCTGTTGCATATGTTGATGGTAGTCGAGGGCGAAGGCCTGTTGCTAGCAGGCTGAGTTTTGTGGAGATGGTTGTACCCTATGGAGATCCAAATGACCCACATTACAGAAAAAATGCTTTTGATGCTGGGGAAGATGGCTTGGGAAAAAATGCACATTCCCTCAAGAAGGGATGTGATTGTTTGGGCTACATCAAATATTTTGATGCTCACTTCACAAATTTCACTGGTGGAGTGGAAACAACTGAAAATTGCGTATGCTTGCATGAAGAGGATCATGGGATTCTCTGGAAGCATCAAGACTGGAGAACTGGCTTAGCAGAAGTCCGAAGGTCTAGAAGACTTTCAGTTTCTTTTATGTGTACTGTGGCTAACTATGAGTATGGATTTTTTTGGCACTTTTATCAGGATGGAAAGATTGAAGCTGAAGTCAAGCTAACTGGAATTCTTAGCTTAGGAGCATTAATGCCTGGAGAGTTTCGAAAATATGGAACCAGGATTGCACCAGGTCTATATGCTCCAGTTCATCAACACTTTTTTGTTGCTCGCATGGACATGTCTGTGGATTCTAAACCTGGTGAAGCTTTGAATCAGGTTGTGGAGGTCAATATGAAAGTTGAGGAACCTGGTGAGAATAATGTTCACAATAATGCATTCTATGCTCAAGAGACTTTGCTCAGATCTGAATTAGAAGCCATGCGTGATTGCAATCCTTTGACTGCTCGACATTGGATTGTAAGGAACACAAGAACTGGCAATAGAACCGGACAATTGACAGGCTACAAGCTAGTACCAGGCTCAAACTGCTTGCCATTGGCGGGTTCTGAGGCCAAGTTTTTAAGAAGAGCTGCTTTCTTGAAGCATAATCTTTGGGTAACAACATATTCTCGCAATGAGATGTTTCCTGGAGGAGAATTTCCTAATCAAAATCCGCGTGTTGGCGAAGGACTAGCTTCATGGGTTAAGCAGAACCGACCTTTGGAAGAAACTAATATAGTTCTATGGTATGTATTTGGAATCACACATGTTCCTCGTCTAGAAGACTGGCCTGTTATGCCAGTAGAACACATTGGCTTTATGCTCATGCCTCATGGATTCTTCAATTGTTCCCCTGCTGTAGATGTCCCACCTAATCCATGTGAAGTGGATTCTAAAGATAATGACATCAAGGATAATGGTGTTTCGAAGCCAATTCAGAGTGGGTTAGCGGCAAAGCTTTAG 2322 0.447 MASASQKTTTPTSSSCCPSGDSSSLAVVAAAASQQQEWTADDRRALIRPLDSLPESSTNAPSTKGITTMTRAQSSHPLDPLSAAEISVAVATVRAAGATPELRDSMRFIEVVLLEPDKHVVALADAYFFPPFQPSLLPRTKGGGPVIPTKLPPRCARLVVYNKKSNQTAIWIVELSQVHAVTRGGHHRGKVISSHVVPDVQPPMDAVEYAECEAVVKSFPPFIEAMKKRGIEDMDLVMVDPWCVGYYSEADAPGRRLAKPLIFCRSESDCPMENGYARPVEGIYVLVDMQNMVVIEFEDRKLVPLPPVDPLRNYTPGETRGGSDRSDVKPLQIIQPEGPSFRVNGYYVEWQKWNFRIGFTPKEGLVIYSVAYVDGSRGRRPVASRLSFVEMVVPYGDPNDPHYRKNAFDAGEDGLGKNAHSLKKGCDCLGYIKYFDAHFTNFTGGVETTENCVCLHEEDHGILWKHQDWRTGLAEVRRSRRLSVSFMCTVANYEYGFFWHFYQDGKIEAEVKLTGILSLGALMPGEFRKYGTRIAPGLYAPVHQHFFVARMDMSVDSKPGEALNQVVEVNMKVEEPGENNVHNNAFYAQETLLRSELEAMRDCNPLTARHWIVRNTRTGNRTGQLTGYKLVPGSNCLPLAGSEAKFLRRAAFLKHNLWVTTYSRNEMFPGGEFPNQNPRVGEGLASWVKQNRPLEETNIVLWYVFGITHVPRLEDWPVMPVEHIGFMLMPHGFFNCSPAVDVPPNPCEVDSKDNDIKDNGVSKPIQSGLAAKL* 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00694 773 SUPERFAMILY Amine oxidase N-terminal region 73 203 IPR016182 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Rops10g00694 773 Gene3D - 59 204 - -
Rops10g00694 773 FunFam Amine oxidase 207 310 - -
Rops10g00694 773 Pfam Copper amine oxidase, N3 domain 202 305 IPR015802 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Rops10g00694 773 MobiDBLite consensus disorder prediction 1 22 - -
Rops10g00694 773 Gene3D Copper amine oxidase, catalytic domain 318 744 IPR036460 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Rops10g00694 773 Pfam Copper amine oxidase, enzyme domain 331 739 IPR015798 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Rops10g00694 773 Pfam Copper amine oxidase, N2 domain 76 166 IPR015800 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Rops10g00694 773 SUPERFAMILY Amine oxidase N-terminal region 201 319 IPR016182 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Rops10g00694 773 FunFam Amine oxidase 321 746 - -
Rops10g00694 773 PANTHER COPPER AMINE OXIDASE 71 754 IPR000269 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Rops10g00694 773 MobiDBLite consensus disorder prediction 749 773 - -
Rops10g00694 773 SUPERFAMILY Amine oxidase catalytic domain 325 744 IPR036460 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Rops10g00694 773 Gene3D - 207 309 - -
Rops10g00694 773 FunFam Amine oxidase 60 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00694 Rops-Chr10 17108514 17115074 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00694 K00276 - gmx:100798722 1396.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g00694 10 17108514 17115074 Rops10g00694 10 17108514 17115074 ECH
Rops2g04049 2 73935105 73938915 Rops10g00694 10 17108514 17115074 PCT