Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00681 ATGGATATTAAGGGATACTCAGTTTCCTTGGAAAGACATAGGAGGAATGAACCATTTTTTTCATCACACAACACAAGAAGCAAACAACACCAATCCATACAACAAGCAAACAATCATGTTGCTGTCCCAGAAGAACAAACGTGTGCACAAAAGAACCATTCTCTGAAATTGGCTGCTTTCACTTCCCAAAACATTCCAACTATGCTACCTGTTTTTGTTGCTTTGTTGCTTCTTGTTACCTCAATTACCCCAGCATTGTCTCACTCCATTGTCTCAGATTCTGGTCACTCTTTGAAGGCTAACCAGAGTTTTAAAGCAGGTGCTGAGTTGGTTAAGTTAAGGAGAATTAGAGCTCATTTGAAGAAGATTAACAAGCCTGCTGTGAAGACAATTCAGAGTCCAGATGGTGATTTGATAGATTGTGTTTTATCTCACCAACAACCAGCTTTTGATCATCCTAAGCTTAAAGGCCAGACACCATTGGATCCACCAGAGAGACCAAAGGGCTACTTCACCAATGGAGAAAATGTAACTGAGAGTTTTCAGCTGTGGACTGATTCTGGTGAAGCATGTCCAGAAGGAACTGTTCCAATCAGAAGAACAACAGAAGAGGATATTCTAAGAGCAAGTTCTATCAAAAGATTTGGAAGAAAACCAAGAGCTGTACGGAGAGACTCAACTAGCAATGGTCATGAGCATGCAGTTGTTTTTGTAAATGGAGATCAATACTATGGAGCAAAGGCTAGCATAAACGTATGGGCACCCCATGTAACTGATCAATATGAATTCAGTTTGTCACAGATATGGGTTATTGCTGGCTCCTTTGGTCATGATCTGAATACCATAGAAGCTGGTTGGCAGGTAAGTCCTGAACTATATGGGGACAACTATCCAAGGTTCTTTACTTATTGGACAACAGATGCATATCACACAACTGGATGCTACAACTTGCTCTGTTCAGGCTTTATCCAAACTAACAACAAGATAGCAATAGGGGCAGCAATCTCCCCAAGATCAGCTTATAACAGTAGACAGTTTGATATTGGCTTAATGGTTTGGAAGGATCCAAAGCATGGACACTGGTGGCTAGAGTTTGGGTCAGGACTAGTAGTAGGGTACTGGCCAGCAAACATGTTTAGTCACTTGAGAAGTCATGCAAGCATGGTACAATTTGGAGGAGAAATTGTGAATACCCATTCAAGGGGTTACCACACTGGCACTCAAATGGGGAGTGGCCATTTTGCAGAAGAAGGGTTTAGAAAAGCAGCATATTTTAGAAACTTACAAGTGGTTGATTGGGATAATAGCTTGCTTCCTCTTTCAAATATTCACCATTTGGCTGATCATTCCAACTGTTATAACATAAGGCAGGGGATCAATAATGCTTGGGGGACTTATTTTTATTATGGAGGTCCTGGAAGGAATGTGAGATGCCCATGA 1440 0.4118 MDIKGYSVSLERHRRNEPFFSSHNTRSKQHQSIQQANNHVAVPEEQTCAQKNHSLKLAAFTSQNIPTMLPVFVALLLLVTSITPALSHSIVSDSGHSLKANQSFKAGAELVKLRRIRAHLKKINKPAVKTIQSPDGDLIDCVLSHQQPAFDHPKLKGQTPLDPPERPKGYFTNGENVTESFQLWTDSGEACPEGTVPIRRTTEEDILRASSIKRFGRKPRAVRRDSTSNGHEHAVVFVNGDQYYGAKASINVWAPHVTDQYEFSLSQIWVIAGSFGHDLNTIEAGWQVSPELYGDNYPRFFTYWTTDAYHTTGCYNLLCSGFIQTNNKIAIGAAISPRSAYNSRQFDIGLMVWKDPKHGHWWLEFGSGLVVGYWPANMFSHLRSHASMVQFGGEIVNTHSRGYHTGTQMGSGHFAEEGFRKAAYFRNLQVVDWDNSLLPLSNIHHLADHSNCYNIRQGINNAWGTYFYYGGPGRNVRCP* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00681 479 FunFam Putative carboxyl-terminal proteinase 252 371 - -
Rops10g00681 479 Pfam Neprosin activation peptide 130 236 IPR025521 -
Rops10g00681 479 Pfam Neprosin 261 472 IPR004314 -
Rops10g00681 479 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 114 475 - -
Rops10g00681 479 Gene3D - 254 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00681 Rops-Chr10 16691180 16695896 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00681 - - mtr:11436542 791.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04036 2 73678772 73682212 Rops10g00681 10 16691180 16695896 ECH
Rops10g00681 10 16691180 16695896 Rops10g00681 10 16691180 16695896 ECH
Rops2g04036 2 73678772 73682212 Rops10g00681 10 16691180 16695896 PCT