Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00665 ATGTCTCAATCTCTTTTCTCCACTATCTCTTCCCCTTCCTTCTCCTCTCATCGCATTCCCTCTCCCAACCGTTACCTCCGTAACGGTACCCTTTTCCTTCATCCTATTCCTCCCCGAATTCAGAAGAAGAGGACCACTGCGATTTCCGCTTCAAACGTCGTCGTTTCTCGAAATGTAGACTCGTCCATTGGGTCCATCACCCAGCTGATCGAGTCGTTGATTAACGGTGTTGATTTATCAGAAGAAGAAGCTGAAGCTTGTCTTGACTTGTTATTGAATGACGCTAATGAAGCTTTGATTAGTGCAGTTCTTGTTCTTTTGAGAGCCAAAGGGGAAACTTATGAAGAAGTTGTGGGGTTGGCGAGGGCTATGATAAAACATGCTATGAAGGTTGAAGGTTTGGATGATGTGGTCGACATTGTTGGAACGGGAGGGGATGGTGCGAACACTGTTAATATTTCAACTGGGGCTTCGATTCTTGCTGCGGCTTGTGGTGTTAAAGTTGCAAAGCAAGGGAACCGTTCGAGTTCTTCTGCTTGTGGAAGTGCTGATGTGTTAGAAGCATTGGGTGTGATTATTGACTTGGGACCTCAGGGGGTAAAAAAGTGTGTAGATGAAGCGGGAATTGGGTTTATGATGTCTCCGAAGTATCACCCGGCAATGAAGATTGTCAGGCCTGTAAGAAAGAAGCTAAAAATTAGAACTGTATTCAATATATTGGGTCCCATGTTAAATCCTGCACAGGCACCTTTTGCAGTTGTTGGAGTATACACAGAAGACTTGGTCTTCAAAATGGCTAAAGCACTTCATAGATTTGGCATGAAAAGAGCTTTGGTTGTCCACTCTGAAGGTTTGGATGAAATCAGTCCTCTTGGACCTGGTCTAGTGCTTGACGTTACACCAGAAAGGGTTGACAAGTTCTCATTCGATCCCTTGGAGTTTGGCATTCCTCGGTGCAATCTTGAAAGCTTAAAAGGTGGTGACCCAGAATATAATGCAGGGATTTTGAAGCGTGTCCTAGGTGGAGAGAGAGGGGCTATTGCAGATGCTTTGATTCTCAATGCAGCAGCAGCTCTATTGGTCAGTGGCCACGTAAGGAACCTAGCTGAGGGGGTGTCTTTGGCCCGTGAAACACAACAATCAGGAAAGGCTCTCAATACCCTAAACTTGTGGAAGGATATCTCAAATAATATAAAAGATGATGCGGCCATTGAACATGCCTGA 1224 0.4502 MSQSLFSTISSPSFSSHRIPSPNRYLRNGTLFLHPIPPRIQKKRTTAISASNVVVSRNVDSSIGSITQLIESLINGVDLSEEEAEACLDLLLNDANEALISAVLVLLRAKGETYEEVVGLARAMIKHAMKVEGLDDVVDIVGTGGDGANTVNISTGASILAAACGVKVAKQGNRSSSSACGSADVLEALGVIIDLGPQGVKKCVDEAGIGFMMSPKYHPAMKIVRPVRKKLKIRTVFNILGPMLNPAQAPFAVVGVYTEDLVFKMAKALHRFGMKRALVVHSEGLDEISPLGPGLVLDVTPERVDKFSFDPLEFGIPRCNLESLKGGDPEYNAGILKRVLGGERGAIADALILNAAAALLVSGHVRNLAEGVSLARETQQSGKALNTLNLWKDISNNIKDDAAIEHA* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00665 407 MobiDBLite consensus disorder prediction 1 21 - -
Rops10g00665 407 SUPERFAMILY Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain 66 131 IPR036320 -
Rops10g00665 407 FunFam Anthranilate phosphoribosyltransferase, chloroplastic 51 132 - -
Rops10g00665 407 NCBIfam anthranilate phosphoribosyltransferase 70 392 IPR005940 GO:0000162|GO:0004048
Rops10g00665 407 Gene3D Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 133 404 IPR035902 -
Rops10g00665 407 Hamap Anthranilate phosphoribosyltransferase [trpD]. 68 394 IPR005940 GO:0000162|GO:0004048
Rops10g00665 407 Gene3D Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 53 132 - -
Rops10g00665 407 Pfam Glycosyl transferase family, helical bundle domain 68 128 IPR017459 -
Rops10g00665 407 PANTHER ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE 63 396 IPR005940 GO:0000162|GO:0004048
Rops10g00665 407 Pfam Glycosyl transferase family, a/b domain 135 385 IPR000312 GO:0016757
Rops10g00665 407 SUPERFAMILY Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 136 391 IPR035902 -
Rops10g00665 407 FunFam Anthranilate phosphoribosyltransferase 132 397 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00665 K00766 - gmx:100794615 560.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g00665 10 16388987 16393103 Rops10g00665 10 16388987 16393103 ECH