Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00664 ATGAATGCGCGTGGCGAAGTTGGTTCACCGGATCCGTTGGATTCGTTTCCTCGGTTACGAGTTCGCGAATCCGACGGTGCCTCTCGCCGCTCTTCCTACGACGGCGATTCCGAGTTGGAACGGTACTGTAGCGCTAACTCGGTGATGGAAACCCCTACCACCAGTATGAGCATGCACAGCGCCATCACCGTTTTCCACGATTTCTCCGATTGCGATTTCGGTTCCGTCAACGATGGTAGTAACACGTCGGATAATTTCACCGACCGGAAGCTCGGAACACATCGGAACTTTCGGTACGGTTCGAGTGGATTGGAATTGTACGGTGACAGCGGTGACGAGTTTTCGATTACCGCACTTGATTCATCGGAGATGATAGGGTTTAACCGGAGCGAAGATTCCGATGGGAATGGAAATGACGGTGAAGAAGGGGAAAGAGAGATTGAGAGGGAAGGAGATGAGGAATCAATGTTCAACTATGGAAGTGATGGTAGTGAGAATGGGAATAAGTTCTATTTATCGAGGAGTGTGCGTTTTCGTGAGGAATCCGAAGTGATGAATGAGAATCCTTTGGTTATGAACTCTTCTGTGGCGTTTGGTTCGAATGATTTCGATGATTTTTCGCAGCAAAAGGAGAATTCCTTGTTTATGAACTCTTCTGTGGCTTTTGGTTCGAATGATTTGGATGATTTTTTACTGCAAAATGGTGCAGTTTCTGCTGTGTCTGATCTATTTCGCAAACCGCAAGAAAAGGAGGAGCATCGAGTTCAAGAGGATAGAGTGAGTTTTGATGGAAAAGAGGAAGGAATGGATGAGAAGGATGTAGTAACAGTCAATGAAGAAGTTGAAGAAACAAATGATAACTGTGATTCAGAAGCTATAAAAGAGGTCAGTGACAGGGACAAATTGGTCACTTGTCCTGAAACTTCTTCTGTTTCCAAGGTCTATGAAGAAGATTTGGATTTGCTACCAGAAGAAGCTTCTCAGAAGAGTTTGAATGTTACTGATGGTGAGAGTGAGGAAAAGGGGAATCGATGTATCAATAGTGAAGAAGCTATTGCCTCTGGTGATGCTCAAGGTGTGAACCCGGATTGGGGTAATTCTCAGTTGAAGTTTGATCACTTTTGTGATAGTAAAGTTGATCAAAGTTCTTCAAATCCATCTGTCCATGTAGGGAATATAAATGCAAAATCATTTGAGAACCTTGAACAAATTGCACCGCCTTTGGATAGTGGAATGAGGAAAACATTAGAGAGTTCTTCCACTAGGAAAACATTAGGGAGCTCTTCCACTTCAACAAATGTCTTAGAAAAAAGTCCTGTGGTATCTAAGATAGAGGACTTTGAGCTAAATGAATTCTATGACGAGGTTGTTCAGGAAATGGAAGAAATTTTACTGGACTCTGTGGATTCTCCTGGGACTAGGCTTGCCATGGGTAACAGATTGTTTGAACCACAATTGTCTATGCCATTAAGAGATGGTGGGTTGACTGCTTCTACTTCTAGTACACATGATGCTTACCTGCTAGTTCAACGCCCAAGAATAAATAGGATTGAAGTGGTAGGTGCAAGGCAGAAGAAAGGGGATGTTTCTTTCAGTGAAAGATTGGTTGGGGTGAAGGAATACACTGTTTATAAAATAAAAGTGTGGAGTGGCAAGGATCAGTGGGAGGTTGAAAGGCGCTATCGGGATTTTCTAACTCTCTATCGTTGCATTAAAACCTTATTCCATGAGCAAGGCTGGCTTTTACCTTTGCCTTGGTCTTCTGTTGAAAAGGAATCCAAGATATTTAGAAGTGCATCTCCTGATATTATTGCGAAGAGAAGTTTTCTCATTCAAGAGTGTTTACAGTCTATTCTCAGTACCAGGTTCTTTTCAAGTCCTCCAAGAGCATTGATTTGGTTTTTGTCACCTCAAGATTCAAATCCTATTTCACCTATGTCAAATGCACCTGTGTCTCTGTCTTCTTCTTTTACAAGAGGGGGGAACATTCAAAACTTCTCCACTTTAGGGAAGACTATATCACTTATAGTAGAAATTCCATCAAATAAATCTATGAGACAGTTGTTAGAAGCACAACATCACACCTGTGCTGGATGCCATAAGCATTTTGATGATGGAAAAACTTTGATTTGGGATTTTGTACAGACGTTTGGATGGGGGAAGCCTCGACTTTGTGAATACACTGGTCAACTGTTCTGCTCTTCTTGCCATACAAATGAGACTGCAGTCTTGCCAGCAAGGGTTTTGCATCATTGGGATTTCACTCATTATCCTGTTTCTCAGCTGGCAAAGTCATATCTGGATTCTATACACGAACAGCCCATGCTTTGTGTCACTGCAGTTAATCCGTTCCTTTTGTCAAAGGTCCCTGCGTTGCTTCATATTATGAGTGTCAGAAAAAAGATTGGAACGATGCTTCCATATGTTCACTGCCCATTCCGGAGGTCTATCAACAGAGGACTTGGAAACCGGAGATATCTTCTTGAAAGCAATGACTTTTTTTCTCTTAGAGATTTGATTGATCTTTCCAAAGGAGTCTTTGCTGCACTTCCTGTGATGGTGGAAACTGTGGCGAGGAAAATCCTGGAACACATTACTGACCAATGCCTCATATGCTGTGATGTGGGAGTCCCCTGTAGTGCCCGACAAGATTGCAGTGACCCATATTCTCTCATTTTCCCATTTCAGGAAGAAGATATTGAAAGGTGCAAAGCTTGCCAGTTGGTTTTCCATAAGCGTTGCTTTAGAAAGCTTACAAGTTGTCCTTGTGGAGCACAACTCAGATTGAATGAGACAAGGAGCTTAGCTAACAGAGCAAGCCAAAGGGGAAGTGGTGAAACAAAAGGAACTTTAGACTTGTTAGGGAGGGGACTGAGTTCTGGGTTGTCACCTAAGTTCCTCTCTGGATTATTTACAAAGGAAAAGCCTGAGAAGACTAGAGAGCATAAAGACCAAAATATCATATTAATGGGTTCCTTACCAAGCACTTCTTTGTGA 2997 0.4248 MNARGEVGSPDPLDSFPRLRVRESDGASRRSSYDGDSELERYCSANSVMETPTTSMSMHSAITVFHDFSDCDFGSVNDGSNTSDNFTDRKLGTHRNFRYGSSGLELYGDSGDEFSITALDSSEMIGFNRSEDSDGNGNDGEEGEREIEREGDEESMFNYGSDGSENGNKFYLSRSVRFREESEVMNENPLVMNSSVAFGSNDFDDFSQQKENSLFMNSSVAFGSNDLDDFLLQNGAVSAVSDLFRKPQEKEEHRVQEDRVSFDGKEEGMDEKDVVTVNEEVEETNDNCDSEAIKEVSDRDKLVTCPETSSVSKVYEEDLDLLPEEASQKSLNVTDGESEEKGNRCINSEEAIASGDAQGVNPDWGNSQLKFDHFCDSKVDQSSSNPSVHVGNINAKSFENLEQIAPPLDSGMRKTLESSSTRKTLGSSSTSTNVLEKSPVVSKIEDFELNEFYDEVVQEMEEILLDSVDSPGTRLAMGNRLFEPQLSMPLRDGGLTASTSSTHDAYLLVQRPRINRIEVVGARQKKGDVSFSERLVGVKEYTVYKIKVWSGKDQWEVERRYRDFLTLYRCIKTLFHEQGWLLPLPWSSVEKESKIFRSASPDIIAKRSFLIQECLQSILSTRFFSSPPRALIWFLSPQDSNPISPMSNAPVSLSSSFTRGGNIQNFSTLGKTISLIVEIPSNKSMRQLLEAQHHTCAGCHKHFDDGKTLIWDFVQTFGWGKPRLCEYTGQLFCSSCHTNETAVLPARVLHHWDFTHYPVSQLAKSYLDSIHEQPMLCVTAVNPFLLSKVPALLHIMSVRKKIGTMLPYVHCPFRRSINRGLGNRRYLLESNDFFSLRDLIDLSKGVFAALPVMVETVARKILEHITDQCLICCDVGVPCSARQDCSDPYSLIFPFQEEDIERCKACQLVFHKRCFRKLTSCPCGAQLRLNETRSLANRASQRGSGETKGTLDLLGRGLSSGLSPKFLSGLFTKEKPEKTREHKDQNIILMGSLPSTSL* 999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00664 998 SMART DUF4206_2 723 930 IPR025258 -
Rops10g00664 998 SUPERFAMILY PX domain 534 640 IPR036871 GO:0035091
Rops10g00664 998 MobiDBLite consensus disorder prediction 134 156 - -
Rops10g00664 998 MobiDBLite consensus disorder prediction 1 41 - -
Rops10g00664 998 PANTHER PLECKSTRIN HOMOLOGY DOMAIN CONTAINING PROTEIN 33 937 - -
Rops10g00664 998 Pfam PX domain 549 637 IPR001683 GO:0035091
Rops10g00664 998 Gene3D - 524 642 IPR036871 GO:0035091
Rops10g00664 998 MobiDBLite consensus disorder prediction 413 432 - -
Rops10g00664 998 SMART PX_2 518 638 IPR001683 GO:0035091
Rops10g00664 998 MobiDBLite consensus disorder prediction 407 432 - -
Rops10g00664 998 ProSiteProfiles PX domain profile. 522 641 IPR001683 GO:0035091
Rops10g00664 998 MobiDBLite consensus disorder prediction 126 164 - -
Rops10g00664 998 Pfam Putative zinc-RING and/or ribbon 723 926 IPR025258 -
Rops10g00664 998 MobiDBLite consensus disorder prediction 16 37 - -
Rops10g00664 998 CDD PX_domain 529 628 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00664 - - gmx:100778899 1323.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g00664 10 16375657 16383506 Rops10g00664 10 16375657 16383506 ECH