Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00658 ATGTTGAGAATTGCTGCAGCTGCGAAGAGACTTGTGGAAACGGCGTCGTTGAAGGCGCCACCACCGGCACTTAGGGTTGTGCCGCGATTCTACCACGAGAAGGTGGTTGACCACTACAATAATCCCCGGAATGTTGGATCCTTCGACAAGAAAGACCCGAACGTGGGTACGGGTCTGGTTGGGGCACCCGCGTGTGGTGACGTCATGAAGCTTCAGATTAAGGTTGATGAGAAAACCGGAAAAATCGTCGATGCTCGCTTCAAAACTTTTGGGTGTGGATCCGCCATTGCCTCTTCCTCTGTCGCTACTGAATGGGTAAAGGGAAAGCAAATGGAGGAAGTTTTATCCATTAAAAACACTGAAATTGCGAAGCATCTTTCACTCCCACCAGTCAAGCTTCACTGCAGCATGCTTGCTGAGGATGCTATAAAAGCAGCTGTTAAAGATTATGAAGCTAAGCGTGCCTCGGGTACTGTAAGCATGGAGGCAACAACTGGAGAGAAAACTGCCACTGCATGA 519 0.4933 MLRIAAAAKRLVETASLKAPPPALRVVPRFYHEKVVDHYNNPRNVGSFDKKDPNVGTGLVGAPACGDVMKLQIKVDEKTGKIVDARFKTFGCGSAIASSSVATEWVKGKQMEEVLSIKNTEIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAKRASGTVSMEATTGEKTATA* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00658 172 FunFam Iron-sulfur cluster assembly protein 31 170 - -
Rops10g00658 172 NCBIfam Fe-S cluster assembly scaffold IscU 31 154 IPR011339 GO:0005506|GO:0016226|GO:0051536
Rops10g00658 172 PANTHER IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOG 9 162 IPR002871 GO:0005506|GO:0016226|GO:0051536
Rops10g00658 172 Pfam NifU-like N terminal domain 31 155 IPR002871 GO:0005506|GO:0016226|GO:0051536
Rops10g00658 172 SUPERFAMILY SufE/NifU 30 154 - -
Rops10g00658 172 CDD IscU_like 31 146 IPR002871 GO:0005506|GO:0016226|GO:0051536
Rops10g00658 172 Gene3D - 30 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00658 Rops-Chr10 16235420 16238089 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00658 K22068 - gmx:100806169 287.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g00658 10 16235420 16238089 Rops10g00658 10 16235420 16238089 ECH
Rops2g04014 2 73475514 73477113 Rops10g00658 10 16235420 16238089 PCT