Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00657 ATGGCGGGTTTGGTAGAAGAGGATCAACAAGTTCTTGGAATTGACGAAGAGGGACAGAATAAGGATACTGAAGGGAACAACAAACGCACACATTTGGAGGGTGGTGGTGGTCAAGGGGAAAGAGACATGGCTCCTGCTTCAGGGAATTCAATTCACAGGTCAGGTTCAAGGCCTCAACTTGATGTTAGCAAAGCTGAAATTCAAGGGAATGTGGAGGAGAAGTATCCCACCATTCTGTTGCCTAATCAATCTGATGATTTATCTCACCTGGCTCTTGACATTGGAGGATCTCTGATAAAGTTGGTGTACTTTTCAAGACATGAAGACCAATCAGCTGATGATAAACGGAAGAGAATTGTGAAGGAGCGACTGGGGCTTTCTAATGGTAACAGGAGAGGCTATCCTATTCTTGGCGGAAGGCTTCACTTTGTGAAGTTTGAAACAAGAAAGATTAACGAGTGCTTAGATTTCATTTATTCAAAGCAGCTTCACTGTGGTGGGTTGGAGTCACGTTACTCTGATGCTGTGGCTGACCAGAATGGCATAATTAAGGCTACTGGTGGTGGAGCATACAAGTATGCTGACCTTTTCAAAGAAAGACTTGGGGTTAGTCTCGACAAAGAAGATGAAATGGATTGTCTTGTGGCTGGAGCAAATTTCTTGCTTAAGGCAATTCGTCATGAAGCTTTCACACACATGGAGGGCCAGAAAGAGTTTGTTCAAATTGACCCTAATGATTTGTTCCCTTATCTTCTAGTTAATATTGGATCTGGTGTTAGTATGATCAAGGTTGATGGGGATGGGAAGTTTGAGAGGGTTAGTGGGACAAATGTTGGTGGTGGTACTTATTGGGGCTTGGGAAGACTGTTAACAAAGTGCAAGAGCTTTGATGAGTTGCTTGAACTGAGCCAGAAAGGAGATAATAGAACTATTGACATGCTTGTCGGGGACATCTATGGTGGTTTGGACTATTCTAAGATTGGCCTATCGGCTTCCACTATTGCTTCAAGTTTTGGAAAAACTATAGCAGAAAAAAAGGAGCTTGAAGACTACAGACCTGAAGACATATCACTGTCTCTTCTACGGATGATTTCATACAATATTGGACAGATAGCTTACTTGAATGCATTGCGATTTCGGTTAAAGAGAATCTTTTTTGGAGGATTTTTTATAAGGGGTCATGCCTATACCATGGACACTATCTCTTTTGCTGTTCATTTCTGGTCTAATGGGGGAGCACAAGCAATGTTCTTGCGGCATGAAGGATTTCTGGGAGCTTTAGGTGCATTTATGAGCTATGAAAAGCATGGTTTAGATGACCTCATGGTGCATCAGTTAGTTGAAAGGTTTCCAATGGGTGCTCCATATACAGGAGGCAAGATTCATGGCCCACCACTTGGAGATTTGAATGAGAAGATTTCATGGATGGAGAAGTTTTTGCAAAAGGGAACTGAGATTACTGCACCCGTGCCTATGACTCCACTTGCTGGAACTACTGGACTTGGGGGTTTTGAAGTTCCCTTGTCAAAAGGAAGTACTCTGCGATCTGATGCAAGTGCTCTAAATGTTGGTGTTCTCCATCTAGTGCCAACATTGGAGGTGTTTCCATTGTTAGCAGACCCAAAATCGTATGAGCCCAATACAATTGATCTCGCGGATCACAGTGAATTAGAATATTGGCTCACTATTTTGTCAGAGCACTTGCCAGATCTTGTGGACAAGGCTGTTGCAAGTGAAGGTGGAACTGATGATGCTAAAAGGAGGGGTGATGCTTTTGCTCGTGCATTTTCTGCCCACTTGGCAAGGTTGATGGAGGAGCCTTCTGCATATGGGAAGTTAGGCCTTGCTAATCTATTGGAAATGAGGGAAGAGTGCTTGAGGGAATTCCAGTTTGTTGATGCCTATAGAAGTATAAAGCAGAGGGAAAATGAGGCATCACTTGCTGTTTTACCTGACTTGTTGGTGGAACTTGATAGTATGGATGAGGAAACGAGACTGCTTACTCTAATTGAAGGTGTTCTTGCTGCAAATATTTTTGACTGGGGATCTCGTGCATGTGTGGATCTATATCATAAAGGAACTATTATTGAAATTTACAGAATGAGTCGCAATAAAATGCAGCGACCTTGGCGGGTGGATGATTTTGACGTCTTCAAAGAGAGAATGTTAGGGAGTGAGGACAAGAAAATGCCCCCTCATAGAAGGTCTTTACTTTTTGTCGATAATTCAGGTGCGGACATTGTTCTAGGGATGCTTCCACTGGCAAGGGAGCTCCTCCGTCGTGGAACTGAAGTAGTTCTGGTTGCAAACTCACTTCCTGCTTTAAATGATGTGACTGCAATGGAGCTTCCTGATATTGTAGCTGAGGCTGCCAAGCATTGTGACATTCTTAGGCGAGCTGCTGAAGCTGGAGGCTTGCTTGTGGATGCAATGATCAGTACTTCAGACAGCTCTAAAAAAAATTCATCTTCAGTCCCCTTGATGGTTGTTGAGAACGGGTGTGGTAGTCCATGTATAGACTTAAGACAGGTCAGCTCGGAGTTGGCTGCTCCCGCAAAAGATGCCGATTTGATAATTTTGGAAGGGATGGGTAGAGCTCTTCATACCAACCTTTATGCTCAGTTTAAGTGTGATGCTTTGAAGAGTTTACTGAGCTAA 2658 0.433 MAGLVEEDQQVLGIDEEGQNKDTEGNNKRTHLEGGGGQGERDMAPASGNSIHRSGSRPQLDVSKAEIQGNVEEKYPTILLPNQSDDLSHLALDIGGSLIKLVYFSRHEDQSADDKRKRIVKERLGLSNGNRRGYPILGGRLHFVKFETRKINECLDFIYSKQLHCGGLESRYSDAVADQNGIIKATGGGAYKYADLFKERLGVSLDKEDEMDCLVAGANFLLKAIRHEAFTHMEGQKEFVQIDPNDLFPYLLVNIGSGVSMIKVDGDGKFERVSGTNVGGGTYWGLGRLLTKCKSFDELLELSQKGDNRTIDMLVGDIYGGLDYSKIGLSASTIASSFGKTIAEKKELEDYRPEDISLSLLRMISYNIGQIAYLNALRFRLKRIFFGGFFIRGHAYTMDTISFAVHFWSNGGAQAMFLRHEGFLGALGAFMSYEKHGLDDLMVHQLVERFPMGAPYTGGKIHGPPLGDLNEKISWMEKFLQKGTEITAPVPMTPLAGTTGLGGFEVPLSKGSTLRSDASALNVGVLHLVPTLEVFPLLADPKSYEPNTIDLADHSELEYWLTILSEHLPDLVDKAVASEGGTDDAKRRGDAFARAFSAHLARLMEEPSAYGKLGLANLLEMREECLREFQFVDAYRSIKQRENEASLAVLPDLLVELDSMDEETRLLTLIEGVLAANIFDWGSRACVDLYHKGTIIEIYRMSRNKMQRPWRVDDFDVFKERMLGSEDKKMPPHRRSLLFVDNSGADIVLGMLPLARELLRRGTEVVLVANSLPALNDVTAMELPDIVAEAAKHCDILRRAAEAGGLLVDAMISTSDSSKKNSSSVPLMVVENGCGSPCIDLRQVSSELAAPAKDADLIILEGMGRALHTNLYAQFKCDALKSLLS* 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00657 885 Gene3D - 313 422 - -
Rops10g00657 885 PANTHER PANTOTHENATE KINASE 59 802 IPR004567 GO:0004594|GO:0005524|GO:0015937
Rops10g00657 885 SUPERFAMILY Actin-like ATPase domain 200 433 IPR043129 -
Rops10g00657 885 Gene3D - 81 241 - -
Rops10g00657 885 Gene3D - 546 632 IPR035073 -
Rops10g00657 885 Pfam Fumble 89 431 IPR004567 GO:0004594|GO:0005524|GO:0015937
Rops10g00657 885 FunFam Pantothenate kinase 2 546 632 - -
Rops10g00657 885 FunFam Pantothenate kinase 1 89 227 - -
Rops10g00657 885 FunFam Pantothenate kinase 2 81 241 - -
Rops10g00657 885 PIRSF PanK_long 43 884 IPR015844 GO:0004594|GO:0015937
Rops10g00657 885 Gene3D Uncharacterised protein PF01937, DUF89, domain 3 711 885 - -
Rops10g00657 885 SUPERFAMILY Actin-like ATPase domain 88 228 IPR043129 -
Rops10g00657 885 NCBIfam type II pantothenate kinase 89 432 IPR004567 GO:0004594|GO:0005524|GO:0015937
Rops10g00657 885 FunFam Pantothenate kinase 2 228 413 - -
Rops10g00657 885 MobiDBLite consensus disorder prediction 1 62 - -
Rops10g00657 885 Pfam Damage-control phosphatase ARMT1-like domain 617 878 IPR002791 -
Rops10g00657 885 SUPERFAMILY AF1104-like 525 881 IPR036075 -
Rops10g00657 885 MobiDBLite consensus disorder prediction 14 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00657 Rops-Chr10 16201549 16225231 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00657 K24265 - gmx:100781580 1589.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04011 2 73423403 73435943 Rops10g00657 10 16201549 16225231 ECH
Rops10g00657 10 16201549 16225231 Rops10g00657 10 16201549 16225231 ECH
Rops2g04011 2 73423403 73435943 Rops10g00657 10 16201549 16225231 PCT