Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00650 ATGGCAAACCAATCAATTGAGCTGGCCATTGAAAAGCTGAAGAACCTTCTCAGAGAGAAGGAGGAACTTAATGGGGTGGCAGCTGCAAAAATTGAGGAGCTTGTAACTGAGTTGCAGTTAAATTTTCCACTTGACCCTGCTGGGATGAGAATCATACAAGGGTTTACTTACTTCAGGAACAACAATTTCGACAAGAACCGGGATCTGTACAAGGAACTTGCTAATGGCCAAAAACCCAAGTTTTTGGTATTTGCTTGCTCTGATTCTCGGGTGAGTCCATCAGTTATCTTGAATTTCCAACCTGGAGAAGCTTTTATGGTTCGCAACATTGCTAACATGGTCCCTGCATTTAATCAGCTAAGGTACAGTGGAGTTGGTGCAGCCATTGAGTATGCCATCACGGCTCTTGGGGTGCGAAACATCTTGGTGATTGGACATAGTCGCTGTGGTGGAATAGCAAGACTTATGAGTCATCCAGAGGATGGCTCTGCTCCCTTTGACTTCATAGATGATTGGATGAAAATTGGTTTACCTGCCAAAATCAAGGTAATGAAAGAATATGAAGGCTACGATCCCAAAGAACTATGCAAATTCTGTGAAAAGGAGTCAGTGAATAACTCAATAATGAACCTGCAGACATATCCATATGTTGATGAAGCAATAAGGAACAAGAAATTAGGACTGTTGGGGGGTTACTATGATTTTATGGTCTCACCGCTCCCCCTACTCCGCTCCCCACCATATTTGCCTACGTACGCCGCCGTCAACTACCAGACATCCACCGTCTCTTCTCAAATCATCTCTTACTTTTTTCGTTCAGATCTGCGACGCCACTTCTCCAACTCCTCTCTTTGTGTCTTTGTTGATCACACACAGGTTGGTCTCCACTCCATCAATTCAGTTCCTGATTTCATTCTTAAGGAGCAGAAGTTTTTTCACTCGTTGTATGATTCATAG 957 0.4336 MANQSIELAIEKLKNLLREKEELNGVAAAKIEELVTELQLNFPLDPAGMRIIQGFTYFRNNNFDKNRDLYKELANGQKPKFLVFACSDSRVSPSVILNFQPGEAFMVRNIANMVPAFNQLRYSGVGAAIEYAITALGVRNILVIGHSRCGGIARLMSHPEDGSAPFDFIDDWMKIGLPAKIKVMKEYEGYDPKELCKFCEKESVNNSIMNLQTYPYVDEAIRNKKLGLLGGYYDFMVSPLPLLRSPPYLPTYAAVNYQTSTVSSQIISYFFRSDLRRHFSNSSLCVFVDHTQVGLHSINSVPDFILKEQKFFHSLYDS* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00650 318 FunFam Carbonic anhydrase 45 244 - -
Rops10g00650 318 Coils Coil 3 33 - -
Rops10g00650 318 CDD beta_CA_cladeB 54 235 IPR045066 GO:0004089|GO:0008270
Rops10g00650 318 SMART Pro_CA_2 74 241 IPR001765 GO:0004089|GO:0008270
Rops10g00650 318 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 2. 130 150 IPR015892 GO:0004089|GO:0008270|GO:0015976
Rops10g00650 318 Pfam Carbonic anhydrase 82 235 IPR001765 GO:0004089|GO:0008270
Rops10g00650 318 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 86 93 IPR015892 GO:0004089|GO:0008270|GO:0015976
Rops10g00650 318 Gene3D Carbonic anhydrase 43 242 IPR036874 GO:0004089|GO:0008270
Rops10g00650 318 PANTHER CARBONIC ANHYDRASE 32 236 IPR001765 GO:0004089|GO:0008270
Rops10g00650 318 SUPERFAMILY beta-carbonic anhydrase, cab 50 235 IPR036874 GO:0004089|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00650 Rops-Chr10 15908986 15916506 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00650 K01673 - gmx:547671 366.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g00650 10 15908986 15916506 Rops10g00650 10 15908986 15916506 ECH