Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00647 ATGGCAACTCACACTACTACCATGAAAAAATCGTTGTCGAAGAGAAGCTCCGAGTCGCCGAGTCAATTCGAATCGCCTCTCCGCTTTAGCTCTCCCATAGGATGGGGCGGAGCTGAACCGCCGGAGTCACCGGAATACCGATCGCCGGAAAACTCGCCGGGAAAGATGGTTGACAACTCGATGGCCGTGGTGGCCGTCGACAAGCTGAGGCAGTTTTCTTCCAATAAGCCCGCGGAGCACCAGAAGCCGCCGGAGAACGCACCATCGTCGGGGGTGACGATGTTCAACCGGCCGACGAGGGAGGAGTCCCAACGGCGGGAGAGACCGACGTCGGATACGTCGGGGTGGAGGAGGGAGGAGACGGTGAGGAAGGTGGCGCTAGGGTTCCGGCTGAGTGAGGTGGTGGTGTGTCTGATTTCGTTTTCGGTTATGGCTGCGGATAAGACACAAGGTTGGAGTGGTGACTCGTTTGATCGCTATAAAGAATACAGGTATTGTTTGTGTGTGAATATTATAGCATTTGCATACTCAGGATTACAAGCATGTGACCTAGCCTTTCAACTAGCCACGGGGAAACACATAATCAGTCACCACCTTCGTTACCACTTTGACTTCTTCATGGATCAGGTTCTGGCATATCTTCTGATATCAGCATCATCATCTGCAGCCACACGGGTTGACGATTGGCAATCGAATTGGGGGAAAGATGAGTTCACAGAGATGGCCACTGTTTCAATTGGAATGTCCTTCCTTGCTTTTGTTGCCTTTGCCATGAGCTCACTAATCTCTGGTTACATCCTCTGTACCCGTGACTCCTTGTGA 822 0.5219 MATHTTTMKKSLSKRSSESPSQFESPLRFSSPIGWGGAEPPESPEYRSPENSPGKMVDNSMAVVAVDKLRQFSSNKPAEHQKPPENAPSSGVTMFNRPTREESQRRERPTSDTSGWRREETVRKVALGFRLSEVVVCLISFSVMAADKTQGWSGDSFDRYKEYRYCLCVNIIAFAYSGLQACDLAFQLATGKHIISHHLRYHFDFFMDQVLAYLLISASSSAATRVDDWQSNWGKDEFTEMATVSIGMSFLAFVAFAMSSLISGYILCTRDSL* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00647 273 MobiDBLite consensus disorder prediction 1 116 - -
Rops10g00647 273 MobiDBLite consensus disorder prediction 1 28 - -
Rops10g00647 273 PANTHER CASP-LIKE PROTEIN 4A4 97 268 - -
Rops10g00647 273 MobiDBLite consensus disorder prediction 99 116 - -
Rops10g00647 273 Pfam Casparian strip membrane protein domain 121 255 IPR006702 -
Rops10g00647 273 MobiDBLite consensus disorder prediction 76 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00647 Rops-Chr10 15836864 15839359 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00647 - - gmx:100789870 350.517
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04002 2 73161183 73162738 Rops10g00647 10 15836864 15839359 ECH
Rops10g00647 10 15836864 15839359 Rops10g00647 10 15836864 15839359 ECH
Rops2g04002 2 73161183 73162738 Rops10g00647 10 15836864 15839359 PCT