Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00644 ATGAGAATCCACTTCATCTTGTTGTTCTTGTCACTCTCATCTTTCCATGTTACTGGAACAAGCAAGGGAATTTCTGAAAAACATAATTCAATGAAGATGAATCCTTTTAGCCCCAAAGCCTCACTCATTCGTTACTGGAACACACGCATCACCAACAAGGTTCCAATCCCTCATTTTCTTCTTTCTAAAGCTTCACCTCTTACACCTCACCAATTTGCCATCCTCATGAAGCTTCTCAACAACAAAAACAAACCCTTCTTATTCACTTCACAGTTTCACCATTCTCTTTGTTCCACATCAAACTTGTTCTGCTCCTTTGATGACCAAAACCAAAACACACTTCAACAAAACTCCACCAGTACCAAAAACGACGCCAACTTCGCCGTTTACTCCAACAAACGCTTCGCAAACTACGGTTCCTCCCGAGTCGGTGGAGTCGACTCGTTCAAGAACTACTCAAACGAGTTGAACACAAACAACGACTCGTTCAAGAGATACAGCACAACCTCAACTCGCCACGGTGGCCAGTTCAATAGCTACGCAGAAAACGGCAATGTGGCTAACACCAACTTCACCAGCTACGGTTCCAGCGCCACCTCAAGCTCCGGAGAGTTCAACAACTACGACAAGCTCGTCAACGTTCCCAACCTCGGATTCTCAACCTACGACCCCGCCGCCAAAAACCACAAACTCTCTTTCACTAGCTACGGAAACGAAACAAACTCTGGCACACAATCTTTCATTAGCTACGGAAAACACGTCCGTAGCGGAACCAGTGATTTCACAAACTACGCCGTTGGTTCCAATATACTACAATCCTCGTTCACGAGTTACAGTGAGTTGGGTACTGGGTCCACCAACGATTCCTTCAAGTCCTACAGTTTCTCCGGCAACAACCCTCGGAACAGTTTCAAAACCTACGGTGCAGGTTCCGACACGTTCCTCAGTTACCGTAACCGTGCCAACGTTGGTGATGACTCGTTTCAAAGCTACGCCGTTAAATCTAACTCCGGCGGCAGTGCCACGTTTGCAAACTACGGACAATCTTTTAACGTGGGAAACGACACTTTCACGGAATATGGAAAAGGGTCATCGGGTCGGACCTCGTTCGGGTTCAAGACATACGGGTTGGGTCGCGGGTTCAAAGGGTATAACAAACAAGGCGCGTCGTTTTCTGGGTACCGGAATTTCAGTGGGTTCAGTGGCAAAGTCGTAAATAGATGGGTTGAACCGGGTAAGTTTTTCAGAGAGTCGATGTTAAAGGAAGGGAACGTGATTGTTATGCCAGATATTAGAGACAAAATGCCTGAAAGGTCGTTTTTGCCCCTGGCTATTTCGTCAAAATTACCGTTTTCCTCATCGAGGCTGGGTGAAATGAAGCGAGTGTTCCACGCGCGGGAGGGTTCCGCTACTGAGCGCGTGATTGTTAACGCTTTGGGAGAGTGTGAGAGGGTTTCGAGCAAGGGTGAAACGAAACGGTGCGTTTCATCAGCTGAGAGAATGATAGAGTTTGCTATATCAGTGCTGGGTCGCAATGTGGTAGTGAGAACCACTGAGAATGTGAATGGGTCCAAAATGAATGTGATGATTGGGAAGGTATATGGAGTGAATGGTGGAAAAGTGACCAAGTCAGTTTCATGTCATCAGACTTTGTACCCTTACTTACTGTATTATTGTCACTCTGTCCCCAAAGTGAGAGTCTATGAAGCTGATATTCTTGACGTGGACACCAAGGTAAAGATCAATCATGGGGTTGCCATCTGTCACCTTGACACGTCAGCGTGGGGTCCAAATCATGGGGCCTTCTTGGCATTGGGGTCCACCCCTGGAAGAATTGAAGTGTGCCACTGGATTTTCGAGAATGACATGACTTGGACCATTGCCAATTAA 1890 0.4672 MRIHFILLFLSLSSFHVTGTSKGISEKHNSMKMNPFSPKASLIRYWNTRITNKVPIPHFLLSKASPLTPHQFAILMKLLNNKNKPFLFTSQFHHSLCSTSNLFCSFDDQNQNTLQQNSTSTKNDANFAVYSNKRFANYGSSRVGGVDSFKNYSNELNTNNDSFKRYSTTSTRHGGQFNSYAENGNVANTNFTSYGSSATSSSGEFNNYDKLVNVPNLGFSTYDPAAKNHKLSFTSYGNETNSGTQSFISYGKHVRSGTSDFTNYAVGSNILQSSFTSYSELGTGSTNDSFKSYSFSGNNPRNSFKTYGAGSDTFLSYRNRANVGDDSFQSYAVKSNSGGSATFANYGQSFNVGNDTFTEYGKGSSGRTSFGFKTYGLGRGFKGYNKQGASFSGYRNFSGFSGKVVNRWVEPGKFFRESMLKEGNVIVMPDIRDKMPERSFLPLAISSKLPFSSSRLGEMKRVFHAREGSATERVIVNALGECERVSSKGETKRCVSSAERMIEFAISVLGRNVVVRTTENVNGSKMNVMIGKVYGVNGGKVTKSVSCHQTLYPYLLYYCHSVPKVRVYEADILDVDTKVKINHGVAICHLDTSAWGPNHGAFLALGSTPGRIEVCHWIFENDMTWTIAN* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00644 629 ProSiteProfiles BURP domain profile. 414 628 IPR004873 -
Rops10g00644 629 Pfam BURP domain 414 626 IPR004873 -
Rops10g00644 629 SMART BURP_2 412 628 IPR004873 -
Rops10g00644 629 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 23 629 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00644 Rops-Chr10 15803936 15806095 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00644 - - lja:Lj1g3v0411530.1 942.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g02714 2 45730819 45733027 Rops10g00644 10 15803936 15806095 ECH
Rops10g00644 10 15803936 15806095 Rops10g00644 10 15803936 15806095 ECH