Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00629 ATGGCAGGAGGAGGAGCTCCATCAGCTAAAGCAGATGAGCCACAACCACATCCACCAAAGGATCAGCTACCTAATATTTCTTACTGCATTACAAGTCCTCCTCCATGGCCTGAGGCCATACTTCTTGGTTTTCAACATTTTCTTGTGATGCTCGGCACAACTGTGCTCATTCCCACTGCTCTTGTTCCTCAGATGGGAGGTGGCAATGAGGAGAAGGCAAAGGTTATTGAAACACTACTTTTTGTAGCTGGTATTAACACATTGCTGCAAACACTGTTTGGATCTCGACTGCCTGCAGTGATTGGAGGGTCTTATACCTTTGTTCCAACCACAATCTCAATTATTCTTGCTGGTCGATTCAGTAGTGAACCAGATCCAATAGAGAAATTCAAGAGGATAATGAGGGCAATTCAAGGTGCTCTTATTGTTGCTTCGACTCTTCAAATAGTACTAGGCTTTAGTGGCCTCTGGCGGAATGTTGCAAGGTTCTTAAGCCCACTTTCAGCAGTTCCTTTGGTATCTCTTGTTGGTTTTGGGCTGTATGAGTTAGGTTTTCCTGGGGTTGCTAAATGTGTAGAGATTGGACTGCCAGAGCTTATATTGCTCGTATTTATTTCCCAGTATGTGCCCCATGTGCTACGTTCAGGGAAACATATCTTTGACCGTTTTGCTGTTATATTTACAATTGTAATTGTGTGGATATATGCTCATATACTCACTGTTGGAGGGGCCTATAACAATGCTGCACCTAAAACTCAGGCATCCTGCCGCACTGATCGTGCTGGACTTATAAATGCTGCTCCTTGGATAAGAGTTCCATATCCCTTTCAATGGGGAGCACCTTCATTTGATGCTGGTGAAGCCTTTGCCATGATGATGGCATCTTTCGTTGCTCTTGTAGAGTCCAGTGGAGCTTTCATTGCTGTATATAGGTATGCAAGTGCAACACATTTACCACCATCGATTCTCAGTCGGGGTATTGGTTGGCAGGGAGTTGGCATCCTGTTATCCGGATTGTTTGGAACAGTTAACGGATCGTCGGTGTCCGTAGAAAATGCAGGTCTTTTGGCTTTGACCCGTGTTGGCAGTAGAAGAGTTGTGCAAATATCTGCTGGATTTATGATTTTCTTTTCAATTCTTGGAAAATTTGGAGCAGTTTTCGCCTCCATCCCACCTGCCATTATTGCTGCCCTGTACTGCTTGTTCTTTGCTTATGTTGGTGCTGGAGGTCTTAGTTTTCTTCAGTTCTGCAACCTCAACAGTTTTAGAACAAAGTTCATATTAGGCTTCTCTATCTTCTTGGGCTTGTCTATACCACAGTACTTCAATGAGTACACAGCAATCAATGGTTTTGGTCCAGTCCACACAGGCGCAAGATGGTTCAATGATATAATCAACGTGCCATTCCAATCAAAACCATTTGTTGCGGGTTGTGTGGCATATTTCCTAGACAACACTTTATACAAGAGAGATGCTGCTATTAGGAGGGACAGAGGAAAACATTGGTGGGACAAGTACAAGTCCTTCAAGGGTGACACAAGAAGTGAGGAGTTCTATTCACTACCTTTCAATCTAAACAAGTACTTCCCATCTGTTTAA 1599 0.4353 MAGGGAPSAKADEPQPHPPKDQLPNISYCITSPPPWPEAILLGFQHFLVMLGTTVLIPTALVPQMGGGNEEKAKVIETLLFVAGINTLLQTLFGSRLPAVIGGSYTFVPTTISIILAGRFSSEPDPIEKFKRIMRAIQGALIVASTLQIVLGFSGLWRNVARFLSPLSAVPLVSLVGFGLYELGFPGVAKCVEIGLPELILLVFISQYVPHVLRSGKHIFDRFAVIFTIVIVWIYAHILTVGGAYNNAAPKTQASCRTDRAGLINAAPWIRVPYPFQWGAPSFDAGEAFAMMMASFVALVESSGAFIAVYRYASATHLPPSILSRGIGWQGVGILLSGLFGTVNGSSVSVENAGLLALTRVGSRRVVQISAGFMIFFSILGKFGAVFASIPPAIIAALYCLFFAYVGAGGLSFLQFCNLNSFRTKFILGFSIFLGLSIPQYFNEYTAINGFGPVHTGARWFNDIINVPFQSKPFVAGCVAYFLDNTLYKRDAAIRRDRGKHWWDKYKSFKGDTRSEEFYSLPFNLNKYFPSV* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00629 532 Pfam Permease family 38 442 IPR006043 GO:0016020|GO:0022857|GO:0055085
Rops10g00629 532 MobiDBLite consensus disorder prediction 1 26 - -
Rops10g00629 532 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 8 530 - -
Rops10g00629 532 NCBIfam purine/pyrimidine permease 40 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00629 Rops-Chr10 15490807 15497583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00629 6 532 Organic Solute Cotransporters AT5G49990 80.645 0.0 865
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00629 - - gmx:100812585 1011.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g00629 10 15490807 15497583 Rops10g00629 10 15490807 15497583 ECH
Rops2g03974 2 72712736 72718693 Rops10g00629 10 15490807 15497583 PCT