Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00621 ATGGAGTCACCTTTTCCCGCCGTTTTTCTCATCTTCCTCTTTGTCTTCTCTTCCTCAAAACACGCCCTGTCTTCCAACGTGGGCGTTGACGCCATCTCCGGCCTTCTTCAAATCCAAGACCGAGAGAGGGCTCCCCCGTCAGTCCAGGAAGCCGCCGCACGCGGCGTCCTCCTCCGCTTGCTGCCTTCTCATTCCTCCAGCTTCCACTTCCGGATCGTCTCCAAGAAGCAATGCGGTGGCGAATATTGTTTCGTGATCAAAAACCATCCTTCTTTCACAACACAAGGAGGTCCTCAAATTCTAATTGAAGGGACAACAGGAGTGGACATTGTAGCTGGTTTGCACTGGTATCTGAAGCATTGGTGTGGTTCCCATATATCGTGGGACAAAACCGGTGGCTCCCAACTATTTTCAGTACCCAATGTGAGGTTTCTGCCTCGTGTTCATGATGCTGGAATCTCAGTTCAGAGGCCTATTCCATGGAGCTATTACCAAAATGCTGTTACTTCTAGCTATTCTTTTGCTTGGTGGGACTGGAAAAGGTGGGAAACTGAAATTGACTGGATGGCTCTGCAGGGTGTCAACTTGCCGCTTGCATTTACAGCACAAGAAGCTATCTGGCAGAAAGTATTCAAGGAGAAATTTAACATGAGCAGTTCTGATTTGGATGATTTCTTTGGAGGCCCCGCATTTCTTGCATGGTCACGTATGGGAAATTTACACGGATGGGGTGGACCACTGCCACAGAGCTGGTTTGATCAACAATTAACCTTACAGAAGAAAATCCTTGCCAGAATGTATGAACTTGGAATGACACCTGTTTTACCAGCTTTTTCTGGAAATGTCCCTGCTGCACTGAAATATATATTTCCATCAGCAAAAATAACACGCTTGGGAAATTGGTTTTCTGTTAAGAATGACCTCAAATGGTGCTGTACTTATCTTCTTGATGCAACTGATCCCTTGTTCATTGAGATCGGGAAAGCATTTGTTGAGCAGCAATTGCAAGAGTATGGAAGAACCAGCCACATATACAACTGCGATACCTTTGATGAGAACACTCCGCCTATTGATGATCCAGAGTACATTTCTTCATTAGGTGCAGCAATCTTTAAAGGAATGCAGAGTGGTGATAATGATGCTGTTTGGTTAATGCAGGGATGGCTATTTTCATATGATCCATTCTGGAGACCTCCTCAAATGAAGGCCCTCTTACACTCTGTTCCTGTTGGAAAGCTGGTGGTTCTTGACCTGTTTGCCGAAGTAAAACCCATATGGATTAGCTCAGAACAGTTTTATGGAGTTCCCTACATCTGGAAAGTCACTTTCCATTTTATATTTATAAATAGAAATAATAATGTCTTAACTAGCACTGGTGGACTTCCCTGCAAATTGTTTGACAATATGGGCTGTGGCAGGTGTATGCTGCACAATTTTGCAGGAAACATTGAGATGTATGGGATATTAGATGCGATAGCATCTGGGCCAATTGAAGCACGTACAAGTGTTAACTCAACGATGGTTGGAGTCGGAATGTCGATGGAAGGTATAGAACAGAATCCCATTGTCTATGATCTGATGTCTGAAATGGCATTTCAACACAAGCAAATTGATGTTAAGGTGTGGGTTGATCTGTATTCAACTAGACGATATGGAAGACCAGTTCCTTTAATACAAGATGGATGGAATGTCTTGTATCACACCATTTACAATTGCACTGATGGAGCCTATGACAAAAACAGAGATGTCATTGTAGCATTCCCAGATGTCGACCCTTCCTTAATTTCAGTACAGCATGAATGGTCTCACAACTATGGCAAGCCATACTCAAGAACAATTACCAAGGAAATAACTGATTCCTTTGATAGACCTCATTTATGGTATTCAACTTCTGAAGTAATTTATGCATTGGAGCTATTTATAGCTAGTGGAGATGAACTTTCAACAAGTAATACTTATAGGTATGATCTTGTTGATCTCACTAGACAAGTTTTAGCAAAATATGCAAATCAGTTGTACTTTAGGGTCATAGAAGCATACCAATCACATGATGTCCATGGAGTGACTCTCCTCAGCCAGAGATTTCTGGACCTAGTGGAAGATTTGGACACACTATTGGCTTGCCATGATGGATTTCTTCTGGGACCTTGGTTAGAAAGTGCAAAGCAACTAGCTCAAAATGAAGAACAGGAGAGACAGTTTGAGTGGAATGCCAGAACACAAATCACCATGTGGTTTGACAACACAGATGAGGAAGCAAGTTTGCTTCGTGACTATGGAAACAAGTACTGGAGTGGGCTTCTGCATGATTACTATGGCCCCAGAGCTGCTATTTATTTTAAATATTTAATAAAGAGCTTAGAGAGAGGCGAGGATTTCATGATAAAGGAATGGAGGAGGGAATGGATAAAGCTTACCAATGATTGGCAAAGCCGTAGGAATATATTTGGAGTGGAAAGTAGAGGAGATGCTCTAAACACTTCCAGGTGGCTCTTCAACAAATACCTGAACCTGAGCAATCCTGAGACCAAGCTTACTCTGCAGAACTGGACTCAACGCAAATCAAGGAAATTTCAATGA 2580 0.4267 MESPFPAVFLIFLFVFSSSKHALSSNVGVDAISGLLQIQDRERAPPSVQEAAARGVLLRLLPSHSSSFHFRIVSKKQCGGEYCFVIKNHPSFTTQGGPQILIEGTTGVDIVAGLHWYLKHWCGSHISWDKTGGSQLFSVPNVRFLPRVHDAGISVQRPIPWSYYQNAVTSSYSFAWWDWKRWETEIDWMALQGVNLPLAFTAQEAIWQKVFKEKFNMSSSDLDDFFGGPAFLAWSRMGNLHGWGGPLPQSWFDQQLTLQKKILARMYELGMTPVLPAFSGNVPAALKYIFPSAKITRLGNWFSVKNDLKWCCTYLLDATDPLFIEIGKAFVEQQLQEYGRTSHIYNCDTFDENTPPIDDPEYISSLGAAIFKGMQSGDNDAVWLMQGWLFSYDPFWRPPQMKALLHSVPVGKLVVLDLFAEVKPIWISSEQFYGVPYIWKVTFHFIFINRNNNVLTSTGGLPCKLFDNMGCGRCMLHNFAGNIEMYGILDAIASGPIEARTSVNSTMVGVGMSMEGIEQNPIVYDLMSEMAFQHKQIDVKVWVDLYSTRRYGRPVPLIQDGWNVLYHTIYNCTDGAYDKNRDVIVAFPDVDPSLISVQHEWSHNYGKPYSRTITKEITDSFDRPHLWYSTSEVIYALELFIASGDELSTSNTYRYDLVDLTRQVLAKYANQLYFRVIEAYQSHDVHGVTLLSQRFLDLVEDLDTLLACHDGFLLGPWLESAKQLAQNEEQERQFEWNARTQITMWFDNTDEEASLLRDYGNKYWSGLLHDYYGPRAAIYFKYLIKSLERGEDFMIKEWRREWIKLTNDWQSRRNIFGVESRGDALNTSRWLFNKYLNLSNPETKLTLQNWTQRKSRKFQ* 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00621 859 PANTHER ALPHA-N-ACETYLGLUCOSAMINIDASE 9 836 IPR007781 -
Rops10g00621 859 Pfam Alpha-N-acetylglucosaminidase (NAGLU) C-terminal domain 542 834 IPR024732 -
Rops10g00621 859 Pfam Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain 163 441 IPR024733 -
Rops10g00621 859 Pfam Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain 474 533 IPR024733 -
Rops10g00621 859 Pfam Alpha-N-acetylglucosaminidase (NAGLU) N-terminal domain 51 146 IPR024240 -
Rops10g00621 859 Gene3D Glycosidases 158 534 - -
Rops10g00621 859 Gene3D - 536 846 - -
Rops10g00621 859 Gene3D - 26 151 IPR029018 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00621 Rops-Chr10 15281042 15292050 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00621 K01205 - gmx:100791160 1503.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g00621 10 15281042 15292050 Rops10g00621 10 15281042 15292050 ECH