Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00617 ATGGGAATTGCAGAGGAGAGGGTCGTTGCTGTTATCATGGTTGGAGGACCCACCAAAGGTACTAGATTCCGGCCATTGTCATTCAACATACCAAAGCCACTTTTTCCATTAGCAGGTCAACCTATGGTTAATCATCCAATTTCTGCTTGCAAAAGGATTCCTAATTTGGCTCAGATTTATCTTGTTGGTTTCTACGAGGAACGTGAATTTGCATTATTTGTATCCTCCATCTCAAATGAGCTTAAGGTCCCTGTTAGATACTTGAAGGAAGACAAGCCACATGGCTCGGCTGGTGGTCTTTATAACTTTAGAGATCTGATCATGGAGGAGGATCCGTCACATATTTTCTTGCTGAACTGTGATGTTTGCTCCAGTTTTCCACTGCCAGAAATGCTGGATGCTCACAAGAAATATGGTGGGATGGGGACAATACTAGTTGTGAAGGTTTCTCCGGAGTCAGCCAGCGAGTTTGGGGAATTGGTAGCTGATCCAGTCACCAATGAACTCTTGCATTACACAGAGAGACCTGAAACTTTTGTAAGTGATCGAATAAACTGTGGTGTGTATATATTTACACCAGATATCTTTACTGCCATTGAGGGTGTTTCTACTCAGCGGAAAGACAGAGCTAATCTAAGACGTGTCTCCAGCTTTGAAGCAATGCAGACAGACACAAGGAGTCTTCCTGCCAGTTATGTCAGATTGGATCAAGACATCCTCTCACCTCTTGCAGGGAAGAAACAGTTGTATATATATGAAACCATGGACTTCTGGGAACAAATCAAAACACCTGGAATGTCCATAAAATGTTCTGCCTTGTATCTTTCCCAATTTCGTTACACAGCCCCTCACCTGTTAGCAAATGGAGATGGTACTAAGAAAGCTAACATCATTGGTGATGTTTATATTCATCCATCAGCAAAAGTGCATCCTTCTGCAAAGATTGGTCCTAGTGTATCAATATCTGCAAATGCTCGCATAGGAGCTGGTGCAAGGCTCATCAGTTGTATCATCCTTGATGATGTTGAAATCAAGGAGAATGCTGTTATTCTTCATGCAATTATTGGATGGAAATCCTCTATTGGACGTTGGGCCCGTGTCCAGGCTAGTGGAGATTACAAAGCAAAACTCGGGGTCACTATACTTGGTGAATCTGTTACTGTTGAGGATGAGGTAGTGGTTGTTAACAGCATTGTCCTTCCGCATAAGACCCTAAATGTCGGTGTTCAAGAGGAAATTCTTTTATAG 1248 0.4255 MGIAEERVVAVIMVGGPTKGTRFRPLSFNIPKPLFPLAGQPMVNHPISACKRIPNLAQIYLVGFYEEREFALFVSSISNELKVPVRYLKEDKPHGSAGGLYNFRDLIMEEDPSHIFLLNCDVCSSFPLPEMLDAHKKYGGMGTILVVKVSPESASEFGELVADPVTNELLHYTERPETFVSDRINCGVYIFTPDIFTAIEGVSTQRKDRANLRRVSSFEAMQTDTRSLPASYVRLDQDILSPLAGKKQLYIYETMDFWEQIKTPGMSIKCSALYLSQFRYTAPHLLANGDGTKKANIIGDVYIHPSAKVHPSAKIGPSVSISANARIGAGARLISCIILDDVEIKENAVILHAIIGWKSSIGRWARVQASGDYKAKLGVTILGESVTVEDEVVVVNSIVLPHKTLNVGVQEEILL* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00617 415 Gene3D Hexapeptide repeat proteins 286 410 - -
Rops10g00617 415 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 9 414 - -
Rops10g00617 415 Pfam Nucleotidyl transferase 10 213 IPR005835 GO:0009058
Rops10g00617 415 FunFam Mannose-1-phosphate guanyltransferase alpha 7 278 - -
Rops10g00617 415 CDD M1P_guanylylT_A_like_N 10 274 - -
Rops10g00617 415 SUPERFAMILY Nucleotide-diphospho-sugar transferases 9 357 IPR029044 -
Rops10g00617 415 FunFam Putative GDP-mannose pyrophosphorylase 284 412 - -
Rops10g00617 415 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 3 278 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00617 Rops-Chr10 15202261 15207621 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00617 K00966 - gmx:100817201 751.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g00617 10 15202261 15207621 Rops10g00617 10 15202261 15207621 ECH