Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00603 ATGACTGGAGGATCCTTTGGAGACAACATAGGATTGGAAGAAAGGCTTATCAAGAAGGCATGTGCTTTGGCCTTCAAAGTTCATAAGTCACCAAAGGTGCACTATCTTTCTAAAAACTCGGAAGCTTATCTTCTTATAAGCTTTCCGGGATCATGGGCTGAAACTGACTGGTTTGCTACCAAACCTTTTGGGGAAACTAAGATCGATCCTGCCCTGTTCCCTTCACTTCGAAGTGTTGGTAATGATGAAGCGGCTTTGGTAAACGAAGCCTTTTTAAAAAGATTTGATCACATATTGAAAAATTCCTCAATTAAATCGGAGGTGAATAAAGCTCTAGCTAAAGGGAAGCTAATAGTGTTTACAGGGCACTCTTCTGGGGCTGCAGTCGCCATTCTTGCAACATTTTGGGCCTTGGAAGAGTACCTTAACCCCACCAAAAACCAAAATCACAACCCTCCCTTCTGTGTCACTTTTGGGTCTCCCTTAGTGGGTGATCATATATTCTCTCATGCATCAAGGCGAGAAAATTGGTCTCGCTACTTCATCCACTTTGTTATGAGGTTTGACATAGTGCCACGGATTTCGCTTGCCCCCTTCTCTTCTATTGAGCAAAACTTTAGCCCCATTCTCCAATTCTTGACTCCTAAGTCCAAACCTTCCACCCAAGATTCAAAGAGTAGAGGCCCTGTGATTTCTGAATTTTACTCCACTGTCATGACGAACGCAGCAGCAGTTACAAGCCATGCTGCTGCCTATAAGCTCAAGGGCAGTGTAAATTTGTTACTGGAGACAGTGACAAATTTTGTTGACTTAAGCCCTTATAGGCCCTTTGGAACCTACATCTTCTGCAACGGTAATGGACAGTCGGTTGTGATAAGAAACTCAGATGCTGTATTGCAACTCATGTTCCACACTGCTCAGCTAAGTGATTCGGCAGAACTTTCTGAAGTTGCCAAAAAAAGCATACTGCAACATCTAGACTATGAAGCTGAATTGGATAATATCTTGAAAATTCAGAATGTGGTGGACTTGGACAAACTTGATGAGCTTCCCTTGTCTGTTGATGGTTCTTCTAATAGTCATATCACAACAACCTTGAATGACCTTGGGCTGAGCACAAGGGCAAGGCTAAGCCTTCGAGCAGCTGGAGAGTTGGAAAAACAAAAGAGCAGTAATGAGGAGAAAATCAGAAACGAGATTAAGGAGAGAGCTGAGCCAAGCATGAAGGCACTGGAAGATTACAAAAGAACATGTGAGATACTTGAGGGAAAGGGTTATTATGATGCTTTCAAGCTGCAAAAGGACACAAAGGACTTCAAGGCAAATGTGGAGAGGCTTGTGCTTGCAGGAGTATGGGATGAGATCATTGAAATGCTGAAGAGGTGTGAACTCCCAGATGAATTTGAAGGCAACCAAGAATGGATTAAACTCGGAACCAGCTTTCGTAGGTTGGTGGAACCTCTAGATATTGCCAACTATTACCGGCATTTGAAGAATATAGATAATGGACCTTATATGATTGAGGGTAGGCCAAAACGATATAGGTACACTCAAAGATGGTTAGAGCATGCTAATAGGATGCCACAAGTTACCTCAGAATCTAGCTTCTGGGCTGAGGTGGAGGAGCTTTGCATCTTGATTAATAACAATAAACAATATGAAGATTTCAAGCAAAGGATTCTGCAACTTGAGCAAGATATTAAGAAGTGGACTGATAAAGGAGAACTAACAAAGGATGTGTTCTTAAAGAATCCTACTTTTGTGACATTGTGGAGAACTCTACCTGAGGAACACAAGGCGAACTCCTTCATCTCCAGTCTTCTAACTGTGAACGCATTGTGA 1842 0.4235 MTGGSFGDNIGLEERLIKKACALAFKVHKSPKVHYLSKNSEAYLLISFPGSWAETDWFATKPFGETKIDPALFPSLRSVGNDEAALVNEAFLKRFDHILKNSSIKSEVNKALAKGKLIVFTGHSSGAAVAILATFWALEEYLNPTKNQNHNPPFCVTFGSPLVGDHIFSHASRRENWSRYFIHFVMRFDIVPRISLAPFSSIEQNFSPILQFLTPKSKPSTQDSKSRGPVISEFYSTVMTNAAAVTSHAAAYKLKGSVNLLLETVTNFVDLSPYRPFGTYIFCNGNGQSVVIRNSDAVLQLMFHTAQLSDSAELSEVAKKSILQHLDYEAELDNILKIQNVVDLDKLDELPLSVDGSSNSHITTTLNDLGLSTRARLSLRAAGELEKQKSSNEEKIRNEIKERAEPSMKALEDYKRTCEILEGKGYYDAFKLQKDTKDFKANVERLVLAGVWDEIIEMLKRCELPDEFEGNQEWIKLGTSFRRLVEPLDIANYYRHLKNIDNGPYMIEGRPKRYRYTQRWLEHANRMPQVTSESSFWAEVEELCILINNNKQYEDFKQRILQLEQDIKKWTDKGELTKDVFLKNPTFVTLWRTLPEEHKANSFISSLLTVNAL* 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00603 613 SUPERFAMILY alpha/beta-Hydrolases 39 199 IPR029058 -
Rops10g00603 613 PANTHER PROTEIN EDS1-RELATED 6 608 IPR044214 GO:0006952
Rops10g00603 613 Gene3D alpha/beta hydrolase 18 332 IPR029058 -
Rops10g00603 613 Coils Coil 546 573 - -
Rops10g00603 613 CDD Lipase_3 44 207 - -
Rops10g00603 613 Pfam Enhanced disease susceptibility 1 protein EP domain 410 604 IPR041266 -
Rops10g00603 613 Pfam Lipase (class 3) 46 196 IPR002921 GO:0006629
Rops10g00603 613 Coils Coil 382 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00603 Rops-Chr10 15044923 15047362 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00603 11 185 Acyl Lipid Metabolism Gene Families AT5G14930 29.143 4.88e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00603 K18875 - gmx:100778851 790.801
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g00603 10 15044923 15047362 Rops10g00603 10 15044923 15047362 ECH