Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00584 ATGAGTTACAAACGTCTTATTCTCTTTCTCTTTTTCATATCACATCTTTTCAAGTTCTCTTCATCTAGTGCTATTTGCACCAACTCAACTGGGTCTGGAATCCCTTCTGAACTTGAGTCTCTCCTGAAGTTCTGTTCTTCCAATGAAAAGGCTTGTTGTGAAGTTAGTGAAGAAGCAAGGTTGCAGATACAAAAACAATTCCAGAAGTTAAATGTCACTGACCCAAAATGTGCTTCTCTCCTCAAGCCCATCTTATGTGATATAAGTGATGATAAGTTTTCTGCAAAATTGTTCCAAAATGTCTCAGCCTTTAGAACTGTTCCCATTTTGTGTAACAACACATTATCAGTGAAGTCACAACAATCAAGTGGTGATCTTTGTCTAGATTTCTGCACGAAGGTATTGGAAACATGTGGAAGTGTTTCTATAATTGATTCCCTCTTTGAATCTTTCTTGCAAGACAAAGCTGGCAAGGAGCTTAGCTTCTTAACTTCCAAATTGAGGAGGAGAAGCTTTTGTGAGACTTTTGGTGGCTCTTCAGAAGATGGAAAAGCATGCTTCCATGGTGAACCAATTTCATTGAACAGTGAACAAACTTCCCATCTTCCTAAGGGTCTATGTTTGGAGAAAATTGGGAATGGTTCTTACATTCACATGGTTCCACATCCTGATGGTTCCAGAGCCTTCTTTGCTAATGTGCAAGGCAAGATCTGGTTGGCAAATATTCCTGTTGAGGGATCCAATGAGATTTTGGAAATTGATGAATCCAAAACCTTCCTAGACATTAGTGATAATGTTCTCTTTGATTCTGGGCATGGTTTAATGGCCATTGCATTTCATCCTAACTTTTCACAAAATGGTCGCTTCTTTCTCTCTTATAATTGTGATCAGATGAAAAATCCATCATGTTCTGGTAGGTGTGCTTGTAACTCAGATGTGAATTGTGATCCTTCAGAACTCGGTTCTGATAATGGTATCCTCCCATGCCAGTATCACAATGTAGTTGCAGAATTTACAGTCAATGGCACATCATCAAAGCCTTCCTTAGCAGAAAGTGCAAATCCATCAGAAGTAAGAAGAATATTCACAATTGGTGTTCCACAAAGTGGAGGTCATGCTGGTCAAATTCTCTTTGGACCTGAAGATGGACACTTGTACCTTGTGTTGGCCGATGGCTCAAATCGTGATGATCCTTACAACTTTGCTCAGAACAAGAGATCCTTACTTGGAAAGATTTTGAGAATTGATGTAGACAATATACCCACAGGTACCAAAGAAATGACTGACATGGACTTGTGGGGAAATTATTCTATACCTAGAGATAATCCATATGTTAATGATAAGGAGCTTGAGCCAGAGATATGGGCTATTGGTTTTAAGAATGCTTGGCGTTGTAGTTTTGACTCTAAGAGACCATCCTATTTTCTCTGTGGAGATGCTGGACAGGATCAATATGAAGAGATTGATATGGTTAAAAAGGGTAAAAACTATGGTTGGCGAGTCTATGAAGGTCCTTTCCTTTTTCATCCATCAGAGTCTCCTGGAGGCAATACTTCTGCCAGTTCCATACAATCAACCTTCCCTGTAATGGGTTACAGTCATTCTGAGAGTGACAGTATATCAGGCTCAGCATCCATTATTGGTGGCTATTTTTATAGGTCCATGACAGATCCTTGCATACATGGAAGGTACTTGTACACAGATATGTATACAGGGTCTGTGCTAGTTGGTACAGAAAGTCCTGAAAACAGTGGAAACTTCACTAGTTCCAAGATTTCTTCAAGATGTGCTCATGATTCTCCAATGCCATGTTCTTTTGATCAGGGAAGTGTTACTCCTTCACTTGGGTATGTTTACTCATTAGCAGAAGATAACAATAAGGACATTTATTATTTGACAAGCACTGGTGTTTACAGAGTGGCACGACCAAATCGTTGCAATTATTTGTGTACTAAGGAAAAGGTTGTTGTTGTTGGTGTAGAAAACAATAAGCCTCACTCTTCTTCACCTTTGTGTGAGGGTTTTGATTTTCTCGTGTTGTTCCTCTTTCTTAGCATACATTTTATGTTAATATAA 2076 0.3907 MSYKRLILFLFFISHLFKFSSSSAICTNSTGSGIPSELESLLKFCSSNEKACCEVSEEARLQIQKQFQKLNVTDPKCASLLKPILCDISDDKFSAKLFQNVSAFRTVPILCNNTLSVKSQQSSGDLCLDFCTKVLETCGSVSIIDSLFESFLQDKAGKELSFLTSKLRRRSFCETFGGSSEDGKACFHGEPISLNSEQTSHLPKGLCLEKIGNGSYIHMVPHPDGSRAFFANVQGKIWLANIPVEGSNEILEIDESKTFLDISDNVLFDSGHGLMAIAFHPNFSQNGRFFLSYNCDQMKNPSCSGRCACNSDVNCDPSELGSDNGILPCQYHNVVAEFTVNGTSSKPSLAESANPSEVRRIFTIGVPQSGGHAGQILFGPEDGHLYLVLADGSNRDDPYNFAQNKRSLLGKILRIDVDNIPTGTKEMTDMDLWGNYSIPRDNPYVNDKELEPEIWAIGFKNAWRCSFDSKRPSYFLCGDAGQDQYEEIDMVKKGKNYGWRVYEGPFLFHPSESPGGNTSASSIQSTFPVMGYSHSESDSISGSASIIGGYFYRSMTDPCIHGRYLYTDMYTGSVLVGTESPENSGNFTSSKISSRCAHDSPMPCSFDQGSVTPSLGYVYSLAEDNNKDIYYLTSTGVYRVARPNRCNYLCTKEKVVVVGVENNKPHSSSPLCEGFDFLVLFLFLSIHFMLI* 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00584 691 SUPERFAMILY Soluble quinoprotein glucose dehydrogenase 214 635 IPR011041 -
Rops10g00584 691 Gene3D - 212 642 IPR011042 -
Rops10g00584 691 FunFam HHIP-like 1 210 635 - -
Rops10g00584 691 Pfam Glucose / Sorbosone dehydrogenase 222 504 IPR012938 -
Rops10g00584 691 PANTHER HEDGEHOG-INTERACTING PROTEIN 62 657 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00584 Rops-Chr10 14804239 14807896 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00584 - - fve:101310424 790.801