Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00429 ATGTATAATCAAGTGAATCGTAATTCTCATTTGGGGCATGGTTCTGCCCCTCCGCCGCCGCCACCACAGGCTTATCAACAGCCTCTGCCACCACCTCCGCCACATTTTCAACATTTTGTCCCACCACCTAACATGGGTGGACCACATGCTCCTCCTCATGTTTATTTACATGGACCTCCAACCAACTCTTCCACATTTATTCCAAATGCTTCAGGGCAATCATATGTTATGCACCATGGAAACCCACAAACATTCCCTAATTCACAGCATTCTTCAAATTTAGGGGTTCAGAGTCAACATCATCATCATCATCCTATTCCACCCCATGTTCCTCCTCCTATTGGACACTCACACCAGGAAACATCATCTTGGGCTCATGGGCAACCAACTAGAGTATTGCCACCTCCCCCACCTCCTCCCTCTACTTCCCAAGGACAAATTTTGTATAATCCTCCTTTCCATCCACCTCATTCACAGCCTGCTGATGTTCAGAATCTTCAGCTTAACCGGAATACTCCTCCACCGCCGCCACCAGCACCCACTTGTGGGTCCGGTTTCATTGCTCCTCCTGTGAATTACCAAGTGCCTTCCATTAATCTGCCGCCACCGCCACCACCATTGCCTACCTCACCACCACCTATGCCACCATCTCCACCTCCTCTTGCCCCTCCTGTAACTTCTGCATCCTCCCTTGCCGTGAGCTCTAATGACCCTAACTTGACAAAGGTTTCTGGCTTGGAATCGAAGGCTGTGGATACAGTTGATGGAGTTGTGGCTCCCTGTCCATCTGGTATTGCACCTTGTGGAGAGGTTTCTGTTGCTGATGGAGATGAGTTGTTGTCAACTAGAAGTGTAATTTCGGATCTTCCCCCACCCCTGCCCCGGCTGACAGAAGAAAAAACTGTGCAGAGGATTGAAGCTTTGTGTCAGCTTATTGCTGAGAATGGTGGTGATTTTGAAGATAAGGTTCGTAGAGATGAATTTCAGAATCCTGAATATGCATTTTTGTTTGGTGGTGACCCAGGAACTGAAGCTGCAATTTCTCACGTGTATTTCCTATGGATGAAGAAGAAATATAATTTGGAACCTAAATGGCATGAAAAGAAAAATGAATCACAGTTAAGGCCTCCAGCAGTAGACTCTTCAGGGGAACAGTATCATCTGCATGCTGCAACTGTAAGTGCTGATTCTGACATGGAGATGGAAGATGATATCACACTTTCTGACAAGGACCAGGGGTCAAATTATGCAATTGAAACCCCAACTCAGCAGCATGATCAGGTTGATGAGGTGTTTAGAATGAATAAGAGAATACACCAGTTGCAGAATTCAACAGAAAATGACCCTGCTGCCAAGGACATCATATCTGCAAGATCAGTTACCAAGGTTCATAGTCCTGTGAATGACTCTACTGATGTAGCTGAATCCGCCCTGGGCACTGTTTTGGAGAGATCAGCAGCTCCTCTAGATGATGATTTCATACGAAATGGTACTTCATCTGATCACAATGAAACAACCAATCCCAAGAGAGATTCTGGGCAACATATAAGGAGTGGCAGCCCAATAAGACTTCTTCAAGATTATGCTTCTGACGACACTTCAGATGATGAAGATGAAGGCTGCGCTGCAGATGCTAATGTTTTTACAGTTTCTGCAGGAGATGACGCTGGTGTTGATGTTTCAGCTGCCCATAAAGTTTCTGAGAGTTGTTTGGAGACTGATATTGTGTCTAAAAGTCCCTCCAGTCCTCAAAAGGGGCTTGGGATGCTCTCCAAAACATCAAAGAATGATTCAGAAATATCTCCACATTTAGTACAAGAGTGTAAGGGAACCTCTAAAAGATCTGTTAATCTTGAGCTTAATCTTGAAAATCAGGTGTCTGTTAATCTTGCTTGTTCGGTAGAAGCTTTCCAGCGAAAAGATGGGTTAGGTGGTACTGGCATAGACAGTGATAGTAAGGGTGGTAATGCTGAACAGGAAGATGAGAAGAAAACCTCAAAGTTTGAACCAACTGTTCTAAAAGTTGATAAATTTGGAAGGCACCCCAGAGAAGGTGCTACAGATAGCGACTCTGATGATTCTTGCCATCATCAGACTAGGAGGCCAAACAAAAGAGATAGAAGCCGGAGTCGCAGCCGGTCTCCTCTAGACAGGAGGAGTAGTAGGAGGAGGAGGAGGAGTCCCCGGAGGAGAAAGGATAAAAGAAGCCGGTCTCGTAGCTGGTCCCCTCTGCACCGTAGAAGCAGGAGCAGGTCTCCAATCTCAAGACGCTCAGGTGACTTTCATGGTCAGAATGTGAAAAGGGACAAGGGTCAGTGCTTTGATTTCATTCGTGGAAAGTGCTATCGTGGAGCATCATGTAGGTACATTCATCATGAATCTGACAAGAATACCACTTCTAGGCGCTATAGGAATAAACATGATCTGGAAGTCTATTCTCATGAAAAAAATTCTAGTATTAATGAAGGTACAAAGAATATTTCTTCTAAAGTGTCAGATTATGAGCATGATGGAGTCAGAAGTCAGGATGTAGATCTTTGCCAGAATGTAACTGGCCAGGAAGTAGTGCAGAGAAAAGAAGATTCTGGGAAGCATGCTGCTGTGTCTACTACCTTTGGTCTCGATGGTCCATCAGTTAATAGCAATCCAAGTTCTGAAGGTTTCAGAGAGGTTGCTCCTGAAGTGCAGGAAACCGTAGTAGTCAGAGAGGAGCCAAAGACTTCAACCCATGTAAATAATAGTTTTCAGAAAGTGGTGACTTCTCATCAGCAACACTTGGTTGATGGCTTTCACCCTGAAGCTTTAAGCAGTAGTGGTGATTTTAGACCATCTGGTGGTACATCTAAAGATGTCATCCCCTCAGAAGATGGTTCATTTGTTCAGCAACTGCAGTCCAATGTTTCTGTTGGAGTTCCAGAACATTCTGGTTATGCATCTGTGACTGATTTATCATCTGATAAAGGATCAATGATTTCTGCTAGTGCTAATAAGGTTTCTGATGGTGAACCTTTACCATTACAATCAACTCAGCTACAGTCAGCCACTAGTTCTGTTGGTCCATGTGTCGCATCAGAGCAGCCTTCATTGCACTCTCAGGCTTATAAAGAGTTACCTCCATATAGTGGTTCCTCAGTGGAATTTCCGCATCATACTTACCAGTTGCCTGCTTCTGTTGTTTCACACTCCCAGGGTGAAAATACTATGCACGTGCCACAAATTCCAAGGCAATATGGTGTGATGCAACCTAATGCAGTTTTCCCTTTCCAATCCTCTAGCAGAGAAAAATTTGAACCTTTCTCGGCTCCGTTACACACACCAAATTCTCACTTCAGTGTACCACCTAATAGCTCTTGGACATCCTTGCCACTACCACCACCACCACCACCACCATCACAAGTGGTGTATAATTCCAGTTTAAACTCAGGAGTTGCAAAATCATTTATCTCTTCAGAATTTAATCAGAATCAACTGAATTCAAGAACTGACTTTGTTTCTCAAACTTCCATGAATCCTGGGTTACCAACTCATTCTCAGAGTTCTAATTTTCAGGATCAAACATACCCTCCAGTGCAGGATCATGCACGGACTTTCATGCTTACAGAACCTCTCTCTCCAAAGCATCTCCCTCAGGGGAACCCAGCTAGTCAGTTGCTTTCAGGCCCTAATCTTAGTAGAGATGACCATAATAATCAGCTTTCTATGCAGGATTCACAATTTTCAAGTTCTACATCTTTTGGTGGCCTGCATCCTCAACCAAAGCAATTTTCCTGGGAGTCAGATGTGAATAGATTACAGCCTTCTTTGGGTGGCAAGTTGCCTCCTGAAGGACATTTTAAGACATCCTCCCACATTCATCCATTGTCACAGAATCAGCAATCAGTTTATAATTTTAAATATTCTGCATCTGATGTTAATTTGGGTTTGCCTGGAGAGACTGTTAGTGTATCCAGATATCCACAAGATGTTCTCGATAGCAATCATTCAAATTCTCTTCCGGCTTTTGGAGGATCAAGAATTTCTGCTCATTATAATCCTTATGCATCAACCTTTGAGCAGCCACTAAGTTCCAAATTCAGTTCAAGTTTTTTTAGACAAGAAAATGACACAATCCTTGGTAACAATTATAGTGCTTCTAGATTGAACCATACTTCTATAAATAGGGAGGGAAATGCCGTTGGATCAAGACAGTCAGCATCCTCACCAACATCAGCTAGAGCTGTTGGTCAGAGTTTACCAAGGTCTGGTGGTGAACAATATGATCCACTTTTTGACAGCATTGAACCATCATCCTCTTTGAAGAAATTTGATTTTGATCAGAAGCAGGAAGTTACAGGTGAATCCAACATCAGTATAAGGCCCAAAAGTTCTTATATGTCTTTGGATGTGAAAGAGAAGAAGCATGAGGAGGTTGGAGCTGTTGCCTCTACCACTTCTCTAACTAATGATGAATATGGTGAGACAGCAGATGCTGAAGTGGGTGCTGTTGAAAATGAGAGCCTAAGTAATGATGTGGATGTTGTGAACATGACTACAGGAGAGGTTGAGATTAATCAGACCAAGTCTCCTGGGAAAAGAAAGAAGAGCAAGGATTCCAGGTCGATGAAATTGTTCAAGATTTCCATTGCAAACTTTGTAAAGGAGGTTTTGAAACCATCATGGCGACAGGGTAATATGAGTAAGGTGGCTTTCAAAACCATTGTGAAAAAGACTGTAGATAAGGTCTCAGGAGCCATGAAAGGCCATCGTGTGCCCAAGTCTCAAGAGAAGATAAGTCAATACATTGACTCATCACAGCGAAAGTTGACTAAACTTGTGATGGGTTATGTGGACAAGTATGTCAAGGTGTGA 4848 0.434 MYNQVNRNSHLGHGSAPPPPPPQAYQQPLPPPPPHFQHFVPPPNMGGPHAPPHVYLHGPPTNSSTFIPNASGQSYVMHHGNPQTFPNSQHSSNLGVQSQHHHHHPIPPHVPPPIGHSHQETSSWAHGQPTRVLPPPPPPPSTSQGQILYNPPFHPPHSQPADVQNLQLNRNTPPPPPPAPTCGSGFIAPPVNYQVPSINLPPPPPPLPTSPPPMPPSPPPLAPPVTSASSLAVSSNDPNLTKVSGLESKAVDTVDGVVAPCPSGIAPCGEVSVADGDELLSTRSVISDLPPPLPRLTEEKTVQRIEALCQLIAENGGDFEDKVRRDEFQNPEYAFLFGGDPGTEAAISHVYFLWMKKKYNLEPKWHEKKNESQLRPPAVDSSGEQYHLHAATVSADSDMEMEDDITLSDKDQGSNYAIETPTQQHDQVDEVFRMNKRIHQLQNSTENDPAAKDIISARSVTKVHSPVNDSTDVAESALGTVLERSAAPLDDDFIRNGTSSDHNETTNPKRDSGQHIRSGSPIRLLQDYASDDTSDDEDEGCAADANVFTVSAGDDAGVDVSAAHKVSESCLETDIVSKSPSSPQKGLGMLSKTSKNDSEISPHLVQECKGTSKRSVNLELNLENQVSVNLACSVEAFQRKDGLGGTGIDSDSKGGNAEQEDEKKTSKFEPTVLKVDKFGRHPREGATDSDSDDSCHHQTRRPNKRDRSRSRSRSPLDRRSSRRRRRSPRRRKDKRSRSRSWSPLHRRSRSRSPISRRSGDFHGQNVKRDKGQCFDFIRGKCYRGASCRYIHHESDKNTTSRRYRNKHDLEVYSHEKNSSINEGTKNISSKVSDYEHDGVRSQDVDLCQNVTGQEVVQRKEDSGKHAAVSTTFGLDGPSVNSNPSSEGFREVAPEVQETVVVREEPKTSTHVNNSFQKVVTSHQQHLVDGFHPEALSSSGDFRPSGGTSKDVIPSEDGSFVQQLQSNVSVGVPEHSGYASVTDLSSDKGSMISASANKVSDGEPLPLQSTQLQSATSSVGPCVASEQPSLHSQAYKELPPYSGSSVEFPHHTYQLPASVVSHSQGENTMHVPQIPRQYGVMQPNAVFPFQSSSREKFEPFSAPLHTPNSHFSVPPNSSWTSLPLPPPPPPPSQVVYNSSLNSGVAKSFISSEFNQNQLNSRTDFVSQTSMNPGLPTHSQSSNFQDQTYPPVQDHARTFMLTEPLSPKHLPQGNPASQLLSGPNLSRDDHNNQLSMQDSQFSSSTSFGGLHPQPKQFSWESDVNRLQPSLGGKLPPEGHFKTSSHIHPLSQNQQSVYNFKYSASDVNLGLPGETVSVSRYPQDVLDSNHSNSLPAFGGSRISAHYNPYASTFEQPLSSKFSSSFFRQENDTILGNNYSASRLNHTSINREGNAVGSRQSASSPTSARAVGQSLPRSGGEQYDPLFDSIEPSSSLKKFDFDQKQEVTGESNISIRPKSSYMSLDVKEKKHEEVGAVASTTSLTNDEYGETADAEVGAVENESLSNDVDVVNMTTGEVEINQTKSPGKRKKSKDSRSMKLFKISIANFVKEVLKPSWRQGNMSKVAFKTIVKKTVDKVSGAMKGHRVPKSQEKISQYIDSSQRKLTKLVMGYVDKYVKV* 1616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00429 1615 MobiDBLite consensus disorder prediction 1203 1283 - -
Rops10g00429 1615 MobiDBLite consensus disorder prediction 1164 1188 - -
Rops10g00429 1615 MobiDBLite consensus disorder prediction 640 767 - -
Rops10g00429 1615 SUPERFAMILY Surp module (SWAP domain) 287 358 IPR035967 GO:0003723|GO:0006396
Rops10g00429 1615 MobiDBLite consensus disorder prediction 227 242 - -
Rops10g00429 1615 ProSiteProfiles SURP motif repeat profile. 304 352 IPR000061 GO:0003723|GO:0006396
Rops10g00429 1615 MobiDBLite consensus disorder prediction 195 225 - -
Rops10g00429 1615 MobiDBLite consensus disorder prediction 1209 1263 - -
Rops10g00429 1615 MobiDBLite consensus disorder prediction 58 99 - -
Rops10g00429 1615 MobiDBLite consensus disorder prediction 489 522 - -
Rops10g00429 1615 MobiDBLite consensus disorder prediction 130 145 - -
Rops10g00429 1615 Pfam Surp module 305 355 IPR000061 GO:0003723|GO:0006396
Rops10g00429 1615 PANTHER PROTEIN FRIGIDA-ESSENTIAL 1 1055 1614 - -
Rops10g00429 1615 Gene3D Surp module 301 360 IPR035967 GO:0003723|GO:0006396
Rops10g00429 1615 MobiDBLite consensus disorder prediction 753 767 - -
Rops10g00429 1615 MobiDBLite consensus disorder prediction 170 184 - -
Rops10g00429 1615 MobiDBLite consensus disorder prediction 873 887 - -
Rops10g00429 1615 MobiDBLite consensus disorder prediction 14 55 - -
Rops10g00429 1615 MobiDBLite consensus disorder prediction 572 601 - -
Rops10g00429 1615 MobiDBLite consensus disorder prediction 1389 1409 - -
Rops10g00429 1615 MobiDBLite consensus disorder prediction 993 1012 - -
Rops10g00429 1615 MobiDBLite consensus disorder prediction 1107 1132 - -
Rops10g00429 1615 MobiDBLite consensus disorder prediction 654 700 - -
Rops10g00429 1615 Gene3D - 767 849 - -
Rops10g00429 1615 MobiDBLite consensus disorder prediction 931 954 - -
Rops10g00429 1615 MobiDBLite consensus disorder prediction 716 752 - -
Rops10g00429 1615 MobiDBLite consensus disorder prediction 1 242 - -
Rops10g00429 1615 MobiDBLite consensus disorder prediction 1118 1132 - -
Rops10g00429 1615 ProSiteProfiles Zinc finger C3H1-type profile. 767 794 IPR000571 GO:0046872
Rops10g00429 1615 MobiDBLite consensus disorder prediction 855 891 - -
Rops10g00429 1615 MobiDBLite consensus disorder prediction 1389 1425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00429 Rops-Chr10 11704408 11712093 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00429 - - gmx:100807768 1797.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g00429 10 11704408 11712093 Rops10g00429 10 11704408 11712093 ECH