Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00420 ATGTCAGAAGCAACAGTGATTCTGAAGGATGAGTTGGATATCGTGATTCCAACGATTAGGAACCTTGATTTCTTGGAAAAGTGGAGGGCATTCTTTGAACCTTACCACCTTATAATAGTGCAGGATGGTGACCCTTCTAAGGCCATTAAGGTTCCAGAAGGCTTTGATTATGAGCTCTACAATCGAAATGATATAAACCGGATTCTGGGTCCTAAGGTATCTTGCATTTCCTTCAAGGACTCTGCATGTCGATGCTTTGGCTTCTTGGTCTCTAAAAAGAAGTATATCTTCACCATTGATGATGACTGCTTTGTTGCAAAAGATCCATCTGGCAAAGAAATTAATGCCCTGCAGCAGCACATTAAGAACCTTCTGACTCCATCAACCCCATTTTTCTTCAACACTCTCTATGACCCATATAGAGAAGGTGCTGATTTTGTTCGTGGGTATCCATTTAGTCTTCGTGAAGGTGTCCCAACAGCTGTTTCTCATGGCCTCTGGCTCAACATTCCTGATTATGATGCCCCAACTCAGCTTGTCAAACCTCTTGAAAGAAACACCAGGTATGTAGATGCAGTTATGACAATACCAAAGGGAACCCTCTTTCCCATGTGTGGTATGAATTTGGCATTCAACCGTGAATTGATTGGTCCTGCAATGTACTTTGGACTCATGGGTGATGGTCAACCTCTTGGACGCTATGATGATATGTGGGCTGGTTGGTGCATGAAGATCATAAGTGATCATTTGGGATTGGGGGTGAAGACTGGTTTGCCTTACATTTGGCACAGCAAAGCTAGCAATCCATTTGTGAACCTTAAGAAGGAGTACAAAGGAATTTACTGGCAGGAAGAGCTGATCCCATTCTTCCAATCTGTTTCTCTTCCTAAGGATTGCACAACTGTTCAGAAATGCTACATTGAACTCTCCAAGCAAGTTAAGGCAAAACTTGGTATGGTTGATGAGTATTTCAACAAGCTAGCAGATGCCATGGTCACATGGATTGAAATATGGGATGAAATAAACTCATCTGGGGGAAAATCTGATGTACTGCCCAATGTTCCAGCAAATTAA 1074 0.4227 MSEATVILKDELDIVIPTIRNLDFLEKWRAFFEPYHLIIVQDGDPSKAIKVPEGFDYELYNRNDINRILGPKVSCISFKDSACRCFGFLVSKKKYIFTIDDDCFVAKDPSGKEINALQQHIKNLLTPSTPFFFNTLYDPYREGADFVRGYPFSLREGVPTAVSHGLWLNIPDYDAPTQLVKPLERNTRYVDAVMTIPKGTLFPMCGMNLAFNRELIGPAMYFGLMGDGQPLGRYDDMWAGWCMKIISDHLGLGVKTGLPYIWHSKASNPFVNLKKEYKGIYWQEELIPFFQSVSLPKDCTTVQKCYIELSKQVKAKLGMVDEYFNKLADAMVTWIEIWDEINSSGGKSDVLPNVPAN* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00420 357 PIRSF UPTG 1 346 IPR004901 GO:0016866|GO:0071669
Rops10g00420 357 PANTHER UDP-ARABINOSE MUTASE 4 344 IPR037595 -
Rops10g00420 357 SUPERFAMILY Nucleotide-diphospho-sugar transferases 13 243 IPR029044 -
Rops10g00420 357 Pfam Reversibly glycosylated polypeptide 8 342 IPR037595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00420 Rops-Chr10 11610797 11613504 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00420 K13379 - gmx:100816315 687.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g00420 10 11610797 11613504 Rops10g00420 10 11610797 11613504 ECH