Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00409 ATGAAGGAGTCATTGTTGTTGGGGAGAGAAGAGAGGAGTGAGAGGAAGAGAGGGAAGGTGGTTTGGGAAGGGTTGATGATGATGGGTTTGAAGAATACGGTATCGTCTAGGTCATCGAGGATGAAACTTTGGATGATACGTGCGACCACATCGGTGTTACTGTGGACCTGTCTTGTTCAGTTAACTGCTTTTGGTGACATGTGGGGGCCGAGAGTTTTGAAAGGTTGGCCTTCTTGTTTTTCTCATGAATCCGCACTTGTTGAGTTGCCTTCTGCTAGACCAAGAGTTCTACCACCCAAGAGGGTTTATAAAAACAACGGTTACTTGATGGTGTCGTGTAATGGAGGACTGAACCAAATGAGAGCAGCGATATGTGACATGGTGGCCATTGCAAGATATTTAAATGTCACGCTCATAGTCCCTGAACTGGATAAAGCGTCCTTTTGGGCCGACCCTAGTGAGTTCCAAGACATATTTGATGTGGATCATTTTATTACATCCTTGAGAGATGAGGTGCGGATATTGAAAGAGTTGCCTCCTAGACTCAAAATGAAAGTGGAAAATGGGTTACTTTACAGCATGCCACCGATTAGTTGGTCTGACATGTCTTACTATAAGAACCAGATTCTACCATTGATACAAAAGTACAAAGTTGTCCATTTAAATCGAACGGATGCTCGGCTGGCAAATAATGGCCAATCTTTAGAGATTCAGAAGCTGCGTTGCCGGGTCAATTTTAGTGCTCTTAGATTTACTTCTCAGATTGAGGAGTTAGGCAGAAAGGTGATCAAGCTTCTGAGGCAAAATGGCCCATTTCTGGTGCTTCATCTGAGGTATGAGATGGACATGTTGGCATTTTCTGGTTGTACTCAAGGTTGCAACAGCGATGAGCTGGAAGAATTGACAAGGATGAGATATGCTTATCCTTGGTGGAAAGAAAAAATAATTAATTCTGATTTGAAAAGAAAAGATGGTTTATGTCCTTTGACACCCGAGGAGACTGCGCTTACACTTAGGGCCCTTGACGTTGATCAAAACATTCAAATCTATATTGCAGCCGGGGAAATATATGGTGGGGACAGGAGAATGGCCAGTCTTGCAAAGAACTATCCAAAATTGGTCAGAAAGGAGACACTGTTGGAACCATCTGACCTTCAGTTCTTCCAGAATCATTCCTCTCAGATGGCGGCATTGGATTATCTTGTCTCATTAGAGAGTGATATCTTTGTCCCTACATATGATGGAAATATGGCAAAAGTAGTTGAGGGCCATCGCAGATATCTTGGGTTCAAGAAGACCATTTTATTGAACAGAATGCTCCTAGTTGATTTAATAGATCAATACAATAATGGAGTATTGAACTGGGAAGAATTCTCTTCAGCTGTGAAGGAAGCTCATGCTGATCGCATGGGCGGTGCAACTAAAAGATTGGTAATCCCTGACAGGCCCAAAGAAGAGGATTATTTCTATGCCAATCCAGAGGAGTGTTTAGAACCCTCAGATGATCTGTTGAGTAGTACAGCATGA 1527 0.4276 MKESLLLGREERSERKRGKVVWEGLMMMGLKNTVSSRSSRMKLWMIRATTSVLLWTCLVQLTAFGDMWGPRVLKGWPSCFSHESALVELPSARPRVLPPKRVYKNNGYLMVSCNGGLNQMRAAICDMVAIARYLNVTLIVPELDKASFWADPSEFQDIFDVDHFITSLRDEVRILKELPPRLKMKVENGLLYSMPPISWSDMSYYKNQILPLIQKYKVVHLNRTDARLANNGQSLEIQKLRCRVNFSALRFTSQIEELGRKVIKLLRQNGPFLVLHLRYEMDMLAFSGCTQGCNSDELEELTRMRYAYPWWKEKIINSDLKRKDGLCPLTPEETALTLRALDVDQNIQIYIAAGEIYGGDRRMASLAKNYPKLVRKETLLEPSDLQFFQNHSSQMAALDYLVSLESDIFVPTYDGNMAKVVEGHRRYLGFKKTILLNRMLLVDLIDQYNNGVLNWEEFSSAVKEAHADRMGGATKRLVIPDRPKEEDYFYANPEECLEPSDDLLSSTA* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00409 508 CDD O-FucT_plant 108 433 IPR024709 -
Rops10g00409 508 PIRSF UCP009360 10 494 IPR024709 -
Rops10g00409 508 Pfam GDP-fucose protein O-fucosyltransferase 108 428 IPR019378 -
Rops10g00409 508 PANTHER OS02G0726500 PROTEIN-RELATED 36 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00409 Rops-Chr10 11331650 11335652 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00409 104 497 Miscellaneous Gene Families AT2G37980 49.495 6.17e-132 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00409 K23280 - gmx:100778901 924.08