Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00386 ATGCTCAATGACACTATCATGGCCTTAACAGGAGTTCATTATCCTCACATGGAAGCCACAACAGAAACATACCCAATTGATGATTCCTATGCAATATTCTTGTGGATTGGTACTCCTGTTCAAATTGTGCTTGTGAGGGTGGACATAGGGAGCCCCATTTCATGGTCCCAATGTGACCCTTGTAGCAATTGTTACCCCATGCAACGCTCTCCCTTTAACACTAAAGCATCAAGTACCTTCAAAGAACTTGGTTGTTACTCAGACACATGCTTGATCCCAATGATGAGGGAGGTTTTTGGAAACTGTGCTGGATTGACATGTAGATACAATGTGAAATATGATAAGGAATCTCACTCCTTTGGTGTGATGGTGACTGATACACTCAACTTTGAGTTTTCCAATACTGAGGTTAAGGACTTCATCATGGGATGTGGAGATTCATATGAGGGTCCATTTAGGACTCAATTCTCAGGAGTTTTTGGTCTTGGACGTGGTCCACTTTCAGTGCAAAGTCAAATCCATGCAAAGGCCTTTTCTTTTTGTGCAGTAAGTCAAGAATCAGAGAAACATTCATCTCTTGAGTTTTATGATACCCCACCTCAACATGGTGTTGGTAATAGTTCCATTATGGTTCCCTTGAGAGAGAACAGTGCATACCCTTACTATTACTTTGTGCAGTTTCTGGGTATAGGCATTAATGGGTTTATGTTAGATATTCAATCTAGAGTTTGGGGTTATGGCCTAAACTATGATGGTGGGGTTATTATAGATATAGGAACAACACTAATGTATTTACCAAGTGAGGCATACAGTGTGTTCAGGTCAGAGATACTCAGAACAGATCATAACCTTGCAAAGAAGCCAGGATATGAGGGGTTAGAGTTTTGTTATGAAGATGACCCATCTAATGTTTATCCAACCATTGAATTTTACTTTGAAAATGGCAATATTGCAGGTGAAAATTTTGTGTCTTACAAATTGAACAATAATCAAATACTCTTCAGAACAGAAGAAGGCACAGTTTGCTTATCATTTGCAGAAGGAAAAGGTTCTGCACTTACAGTGATTGGCAGTAACCAGCTCCAAGGAACTCTGTTGACATTTGATCTGGTCAATGAGATCCTTATCTTCACATATGATGAGTGTTAG 1149 0.396 MLNDTIMALTGVHYPHMEATTETYPIDDSYAIFLWIGTPVQIVLVRVDIGSPISWSQCDPCSNCYPMQRSPFNTKASSTFKELGCYSDTCLIPMMREVFGNCAGLTCRYNVKYDKESHSFGVMVTDTLNFEFSNTEVKDFIMGCGDSYEGPFRTQFSGVFGLGRGPLSVQSQIHAKAFSFCAVSQESEKHSSLEFYDTPPQHGVGNSSIMVPLRENSAYPYYYFVQFLGIGINGFMLDIQSRVWGYGLNYDGGVIIDIGTTLMYLPSEAYSVFRSEILRTDHNLAKKPGYEGLEFCYEDDPSNVYPTIEFYFENGNIAGENFVSYKLNNNQILFRTEEGTVCLSFAEGKGSALTVIGSNQLQGTLLTFDLVNEILIFTYDEC* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00386 382 PANTHER ASPARTYL PROTEASES 26 373 IPR001461 GO:0004190|GO:0006508
Rops10g00386 382 Pfam Xylanase inhibitor C-terminal 223 378 IPR032799 -
Rops10g00386 382 Gene3D Acid Proteases 197 382 IPR021109 -
Rops10g00386 382 Gene3D Acid Proteases 13 195 IPR021109 -
Rops10g00386 382 CDD pepsin_A_like_plant 30 382 IPR034161 -
Rops10g00386 382 ProSiteProfiles Peptidase family A1 domain profile. 30 378 IPR033121 -
Rops10g00386 382 Pfam Xylanase inhibitor N-terminal 30 195 IPR032861 -
Rops10g00386 382 SUPERFAMILY Acid proteases 27 382 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00386 Rops-Chr10 10717422 10718570 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g00386 30 382 Miscellaneous Gene Families AT1G77480 22.917 8.37e-16 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00386 - K22683 tpra:123914878 616.69