Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00366 ATGGAGGAGGAGAATTCGAATGCTTCGGAATCAAGAATGGTGTTAGAAGCCCTAAGAAGAAGAGGTTGGTGTTTGGAAGACACAGACCAATTGAAAGCCACCATCGTTATTCAAACCGCACTAACCGATGACCCTTCCCAGGTGGTAGATTCTGTGGAATCGGAGCTCCTCAATTCGGACCTTAGATCCATCGGAGCCAAGTCCTTGCCCGAACCCTCTCTTCTTCGCAACCCTTCTTCTTATCTTCACGGCCCCAAAGTCCTACAGATATCTTCTGTGAGGGACATATCTAGGAGCAGTGTGGATGACATTATAAGAAATTCAGATTTTGATAGTGGAATTTTCCGTGAGTTGATGAATGTTTGGAACAATATGATTCTTACAATTCGTTTGGAAAATAAAGTTGCGGTTCATAGTGGGATAGCTTGCTTAAATCCTAAAGTACTGACTCTATTAGGAGGTGTTGTTCAATCACTCTATGAAGAATGGCAGATGAACCAAAAATATTCAGGATTCTCCCGATCATCTTTAAGGCAGCTAGAGGATGGTGATACAGGTGGTCCTCCCCCTTTTGTGAAGCTGAAGGTTGGATCTTCCTCAGGTTATGCAGATTATAACTCTAGAAGTAGTAAGCCCACTACTGTGGTTGTTCAAGCGGAGAAGAGGCCAACTGGTATCCAGCAAAACCCTAATCAGAAAGTAGATATTTTGGACGTGAATCAAAAATCCACATTGCCTCCAGAAAGAGCTGAAGACAAACCTAGTAGTTCATGGACAAGGCCAAAAGAAGTTGTGGAATCTGTTCCTGTCCAAAATCAAGCAGCTGCGCAAAAATTACTTCAGAAACTGAATCACCCAAATCAGGATGATCGGCATCGTAATCGGAAACATAGGGGCAAAGGAAACAAGAAGATCCATCATGATGAGGATCTTGCTTGGCAGCTTCAGAATCAATTTCACCTGGAAGATTCTCAGGTACAAAGTGGTTCTCTTGAAGCTCAGGCACAAAATATTAGAATGAGTATGTTCACATATGAAAGGGATTCTGATGGCAGCCATCAAATGGCAAGAGGAGGAAGTAGAGGAAGGGGAAGGGGGAGAGGAAGAGACAGAGGAAGAGGAAGGGGAAGGGGGAAGGTGAAGACATGGTTAACCATCTTGCTCTTCTTTCTGGTATTTTGGATATTTTTCTTCTTCATCTTTCATTTAGATCCTTGTTTAGATACTGAAGCTGATTTCATTGAACAAAGAGTCTTGTCTCTATCAGCCTCTCTGTAG 1278 0.428 MEEENSNASESRMVLEALRRRGWCLEDTDQLKATIVIQTALTDDPSQVVDSVESELLNSDLRSIGAKSLPEPSLLRNPSSYLHGPKVLQISSVRDISRSSVDDIIRNSDFDSGIFRELMNVWNNMILTIRLENKVAVHSGIACLNPKVLTLLGGVVQSLYEEWQMNQKYSGFSRSSLRQLEDGDTGGPPPFVKLKVGSSSGYADYNSRSSKPTTVVVQAEKRPTGIQQNPNQKVDILDVNQKSTLPPERAEDKPSSSWTRPKEVVESVPVQNQAAAQKLLQKLNHPNQDDRHRNRKHRGKGNKKIHHDEDLAWQLQNQFHLEDSQVQSGSLEAQAQNIRMSMFTYERDSDGSHQMARGGSRGRGRGRGRDRGRGRGRGKVKTWLTILLFFLVFWIFFFFIFHLDPCLDTEADFIEQRVLSLSASL* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00366 425 SMART DUF1767_2 15 105 IPR033472 -
Rops10g00366 425 Coils Coil 1 21 - -
Rops10g00366 425 MobiDBLite consensus disorder prediction 281 303 - -
Rops10g00366 425 Pfam RecQ mediated genome instability protein 43 101 IPR013894 -
Rops10g00366 425 MobiDBLite consensus disorder prediction 245 259 - -
Rops10g00366 425 MobiDBLite consensus disorder prediction 347 376 - -
Rops10g00366 425 PANTHER SURVIVAL OF MOTOR NEURON-RELATED-SPLICING FACTOR 30-RELATED 16 102 - -
Rops10g00366 425 MobiDBLite consensus disorder prediction 360 376 - -
Rops10g00366 425 MobiDBLite consensus disorder prediction 200 266 - -
Rops10g00366 425 Gene3D - 125 172 IPR042470 -
Rops10g00366 425 MobiDBLite consensus disorder prediction 200 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00366 Rops-Chr10 10246230 10251467 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00366 K18404 - gmx:100782461 398.667
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g00366 10 10246230 10251467 Rops10g00366 10 10246230 10251467 ECH