Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00356 ATGGATGATCACAGAAATTCAACTCCTAATTCCATCGGACTCTGTCTCCTACCACAAGAACTAATCCAGAACATTTTCCTCTCACTCGTGTTACCCGAAATCGTTCGTTTGAAAATTGTTAACAAATCATTTTCACGCATAATCTCCGATCACAGCTTCGTTCGTCAGTGTAACTCACTTTCCAGTTCCACCACTTGGCTCTTTGTTTATAAGAAACGGTGGCTTCGTGACGCCGTGCTTCACGCCTTCACCGACCGGAGCTCCGATCGATGGTTCCGGATCCCCATAGCGGAACTCCTAAAACCCGTTCAATTTCACGGCGAGGATCTTTACTTCCTCGCCGCTTCCGCTAACGTTTTCCTCTTCGCTTCCAACAACGCTCGTGAGGTTGTAGCCGTTAATTTAGTCGCTGTTACCGTTAAGAAGCTACCACCTTCTCCTTTGGGTCCACGTGGCACCTCTTCATGGAGAAGATCCGGAATGAAACTATTGACCGACTCGTCCGGGTCGGGTCATTTCCGTTTCATGTTCGCGGAGTTCGTTGGTGACCGTCCCGTTTTGTTTGTCTACAACTCGGTAACTGACACGTGGAAGTCAACGGAGGCTAAAGAAAACACGACCAATGGTTTTTCGCCACGTGGAGGGGTGCATGTCTTTCTAAACGTGGTTCTTGGACCCAGGGAGAGTGTTCTTGTTGCGTCAACACCAGAGCTTGATGCGCCGGTGGTTCTACGGCCACGATTTGATGGTGAAAGGGAAAGAGGGAATGATGAAGGAAGATTAACCGTTGGATTTAGTTGGGGGAACGTGATTGATCGTTTACACGTGTACGGTGATGGGTACATGATGATTGTGAAATCGGAGGGTACGAGGGTAACTGGAGAGAACGGAATTAATAGGAGTTTGAGGGTGTTGAAAGGTGTGGAATTGTGGGGGTTGAGTTTTGATGGAAGGAACTGGGAGTTTGTGTCTTCTGTTCCTTGTGAAGTGATGAGAGTGATTGAGAAGCCTTATGGGGTAATGATGGGGTGTTTAGAGGAGAAAAATGGGATCATAAAAGCTGCTTTGGTGTCTAATTGTGAGGGATTTTGGGACATGATATGGTTGTCCTTTGATACCAAATGGAACCAGTGGAACTTTATGCCATTGCCTGATTGCAAAATGAAGGGTTGGAACATGGCTGGAATAAGCTTCTCCTCTGGACTTACCTTGCCATGA 1218 0.4713 MDDHRNSTPNSIGLCLLPQELIQNIFLSLVLPEIVRLKIVNKSFSRIISDHSFVRQCNSLSSSTTWLFVYKKRWLRDAVLHAFTDRSSDRWFRIPIAELLKPVQFHGEDLYFLAASANVFLFASNNAREVVAVNLVAVTVKKLPPSPLGPRGTSSWRRSGMKLLTDSSGSGHFRFMFAEFVGDRPVLFVYNSVTDTWKSTEAKENTTNGFSPRGGVHVFLNVVLGPRESVLVASTPELDAPVVLRPRFDGERERGNDEGRLTVGFSWGNVIDRLHVYGDGYMMIVKSEGTRVTGENGINRSLRVLKGVELWGLSFDGRNWEFVSSVPCEVMRVIEKPYGVMMGCLEEKNGIIKAALVSNCEGFWDMIWLSFDTKWNQWNFMPLPDCKMKGWNMAGISFSSGLTLP* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00356 405 SMART fbox_2 17 57 IPR001810 GO:0005515
Rops10g00356 405 CDD F-box_SF 17 49 - -
Rops10g00356 405 Pfam F-box domain 16 54 IPR001810 GO:0005515
Rops10g00356 405 SUPERFAMILY F-box domain 3 74 IPR036047 GO:0005515
Rops10g00356 405 PANTHER BNACNNG10540D PROTEIN 16 378 - -
Rops10g00356 405 ProSiteProfiles F-box domain profile. 11 57 IPR001810 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00356 - - gmx:100805433 644.039