Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g00338 ATGGGGACGAAGAGCAACGAAAATTCCACCCCTAAATCAGATAAAGGCAATAATAATAAAAACAACAACACCAACACAGGTGTGGTGTTGAATGTGTATGATCTCACCCCTCTCAATAATTATTTTTATTGGTTTGGATTGGGAATCTTTCACTCCGGTATTGAAGTACATGGTAAGGAGTATGGATTTGGAGCCCATGACTTCCCATCTAGTGGAGTATTTGAAGTGGAGCCAAGGAAATGCCCTGGATTTATGTACAGATGTTCCATAAATTTGGGCCAAGTAAACATGCAACCATCTGAGTTTCGGACATTCATTGAGAAAATGGCCAGTGAGTTTCATGGAGATACCTATCACCTTATATATAAGAACTGCAATCATTTTACGGATGATGTCTCACGTAGATTGACTCGAAAACGGATCCCAGGTTGGGTCAATCGGCTTGCTAGGCTAGGTTCACTGTGCAGCTGTCTACTTCCAGAAAGTATTCAAGTAACTACAGTTAAACAGCTACCTGAATACCATGAGGAAGATGAAATTGCCGAGTCTCTTTCAACTGACACATCTAGTGAATCACCGGGAGCAGATGACGAACATGAAAAGCGCCTCCTGTCACCTCTGGCTGGAGCAGATAATGTTTCCTTTGTTAAAGAGGCCCAAGTAAAATGA 669 0.4185 MGTKSNENSTPKSDKGNNNKNNNTNTGVVLNVYDLTPLNNYFYWFGLGIFHSGIEVHGKEYGFGAHDFPSSGVFEVEPRKCPGFMYRCSINLGQVNMQPSEFRTFIEKMASEFHGDTYHLIYKNCNHFTDDVSRRLTRKRIPGWVNRLARLGSLCSCLLPESIQVTTVKQLPEYHEEDEIAESLSTDTSSESPGADDEHEKRLLSPLAGADNVSFVKEAQVK* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g00338 222 PANTHER DESUMOYLATING ISOPEPTIDASE 25 192 IPR008580 GO:0008233
Rops10g00338 222 Gene3D PPPDE domains 20 177 IPR042266 -
Rops10g00338 222 SMART DUF862_2a 26 164 IPR008580 GO:0008233
Rops10g00338 222 Pfam PPPDE putative peptidase domain 28 160 IPR008580 GO:0008233
Rops10g00338 222 MobiDBLite consensus disorder prediction 1 23 - -
Rops10g00338 222 ProSiteProfiles PPPDE domain profile. 26 163 IPR008580 GO:0008233
Rops10g00338 222 MobiDBLite consensus disorder prediction 178 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g00338 Rops-Chr10 9601968 9605145 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g00338 K22763 - gmx:100810582 340.887
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g00338 10 9601968 9605145 Rops10g00338 10 9601968 9605145 ECH
Rops2g03703 2 68492601 68497330 Rops10g00338 10 9601968 9605145 PCT